Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0566
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    26   1.1  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.4  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   3.4  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 29  ENYLRQKASKNQKEFNFLLRMALNKLSIDALNLTGKRVLMRVDFNVPLKEGVITN 193
           ++ L +KA ++++EF  LLR   N    D   L G  VL  V+ +V +    I N
Sbjct: 182 DSVLDEKAEEHREEFTALLRELKNAFRSDGYQL-GITVLSHVNSSVFMDIPAIIN 235


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 497 LAPEASTPLPSSSMWKRRFSSR 432
           LA  ++ P+P SS+W R  S R
Sbjct: 56  LAQASTCPVPCSSIWSRPSSMR 77


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -3

Query: 323 TGLRVYLRFTWPSGLPKCDISTTI*RLYPKHI*RNLRQLQC 201
           TGL  YL+ TW   LP      TI  L P     NL Q +C
Sbjct: 85  TGLITYLQATWGCRLPLVQ-GGTISFLVPTLAILNLPQWKC 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,780
Number of Sequences: 2352
Number of extensions: 10392
Number of successful extensions: 83
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)