Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0566
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerat... 144 6e-35
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 3.5
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 3.5
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 3.5
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.5
>U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerate
kinase protein 1 protein.
Length = 417
Score = 144 bits (348), Expect = 6e-35
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = +1
Query: 256 VVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLNDCIGPEVETACANPSAGSIIL 435
VVLMSHLGRPDG+ KYTLKPVAEELK LL KDV FL+DC+G EVE ACA+P+ GS+IL
Sbjct: 58 VVLMSHLGRPDGRRQDKYTLKPVAEELKALLKKDVLFLDDCVGSEVEAACADPAPGSVIL 117
Query: 436 LENLRFHIEEEGKGVDASGAKVKAVQKKLK 525
LENLR+H+EEEGKGVDASGAKVKA +K
Sbjct: 118 LENLRYHLEEEGKGVDASGAKVKADSAAVK 147
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/54 (70%), Positives = 47/54 (87%)
Frame = +2
Query: 92 ALNKLSIDALNLTGKRVLMRVDFNVPLKEGVITNNQRIVAALDSVKYALDKGAK 253
+LNKL+ID LNL GKRVL+RVDFNVPLK+G ITNNQRI AA+ ++++AL GAK
Sbjct: 3 SLNKLAIDQLNLAGKRVLIRVDFNVPLKDGKITNNQRIAAAVPTIQHALSNGAK 56
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +3
Query: 519 VKAFRASLRKLGDVYINDAFGTAHRAHSSMVG 614
VK FR SL KLGD+Y+NDAFGTAHRAHSSMVG
Sbjct: 146 VKKFRESLTKLGDIYVNDAFGTAHRAHSSMVG 177
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 479 TPLPSSSMWKRRFSSRIIEPAEG-LAHAVSTSGPMQSFKNVTSL--FSNFFS 333
TP PSS WK + EG LAH +ST P N T L F N F+
Sbjct: 2 TPFPSSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFA 53
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 1935 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 1968
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2226 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2259
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2241 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2274
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2045 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2078
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 1935 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 1968
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2226 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2259
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2241 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2274
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 2045 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 2078
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 343 LLNKDVTFLNDCIGPEVETACANPSAGSIILLENLR 450
L+N TFLND +G +V NP S+ +L+ LR
Sbjct: 401 LINGSETFLNDVLGRQVTE--ENPRRDSVKILQRLR 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,750,926
Number of Sequences: 27780
Number of extensions: 241531
Number of successful extensions: 656
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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