Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0565
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126340-1|AAI26341.1|  176|Homo sapiens LOC440570 protein.            32   1.5  
AK125737-1|BAC86267.1|  176|Homo sapiens protein ( Homo sapiens ...    32   1.5  
BC063308-1|AAH63308.1|  961|Homo sapiens DDEF2 protein protein.        31   3.4  
AC079782-1|AAY14904.1|  328|Homo sapiens unknown protein.              31   4.6  
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.             31   4.6  

>BC126340-1|AAI26341.1|  176|Homo sapiens LOC440570 protein.
          Length = 176

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 331 RRISSSCPLM*EVFRCHRI-WEPGRFCNSVTGDI 233
           R +S  CP   E +RCHR+ WE GR C+ + G +
Sbjct: 22  RELSKFCPEQTEGWRCHRLRWENGR-CHRLQGKV 54


>AK125737-1|BAC86267.1|  176|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43749 fis, clone TESTI2034749. ).
          Length = 176

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 331 RRISSSCPLM*EVFRCHRI-WEPGRFCNSVTGDI 233
           R +S  CP   E +RCHR+ WE GR C+ + G +
Sbjct: 22  RELSKFCPEQTEGWRCHRLRWENGR-CHRLQGKV 54


>BC063308-1|AAH63308.1|  961|Homo sapiens DDEF2 protein protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +1

Query: 274 KYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLD 453
           K+  N +     D    F +   FT +LTA    +I+N N  + F  DS+   ++  +  
Sbjct: 81  KFGGNRVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKG 140

Query: 454 EGKVPFD 474
           + K PFD
Sbjct: 141 DLKKPFD 147


>AC079782-1|AAY14904.1|  328|Homo sapiens unknown protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 325 FFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFD 474
           F +   FT +LTA    +I+N N  + F  DS+   ++  +  + K PFD
Sbjct: 56  FLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFD 105


>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
          Length = 1022

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 325 FFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFD 474
           F +   FT +LTA    +I+N N  + F  DS+   ++  +  + K PFD
Sbjct: 114 FLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFD 163


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,513,216
Number of Sequences: 237096
Number of extensions: 1815706
Number of successful extensions: 3615
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3615
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)