Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0562
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   2.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  

>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 283 RDVCCDEDSCFTANDRLQCIVLVRKLWQSM 194
           RD+  D D   T ND LQ   L R L +++
Sbjct: 27  RDIFQDSDRPITFNDTLQMKYLERVLLETL 56


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 277 HHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSI 417
           H    + N  + +E +  +     I+T  +   +  FNGGG I  +I
Sbjct: 5   HLEQTLENAGMPDESINISDVIEVIETDPDFHESTMFNGGGEIPQNI 51


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQ 330
           +S  H K    ++NN+   +E LA+
Sbjct: 100 ISFMHKKSFKNFVNNVAALDETLAK 124


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -1

Query: 277 VCCDEDSC 254
           +CC +DSC
Sbjct: 109 ICCSQDSC 116


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 482 FSTALVRTSEGLPPF 438
           FST   RT   LPPF
Sbjct: 310 FSTHFCRTLGSLPPF 324


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 157 IIDSSCRCFSPEAYF 201
           I+D+SCR F+   +F
Sbjct: 298 IVDASCRNFTAARFF 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,505
Number of Sequences: 336
Number of extensions: 3267
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)