Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0562
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...   169   9e-44
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.67 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   3.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.7  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    24   4.7  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   6.3  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score =  169 bits (410), Expect = 9e-44
 Identities = 76/130 (58%), Positives = 90/130 (69%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLS 435
           M LHH KHH  Y+ NLN AEE+L  A AK D+  II L  A+KFNGGGHINHSIFW NLS
Sbjct: 55  MELHHQKHHNAYVTNLNAAEEQLQDAVAKQDVSKIIQLGNAIKFNGGGHINHSIFWKNLS 114

Query: 436 PNGGKPSDVLTKAVEKDFGSWDNLRINCRQLLWQYRGSGWGWLGYNKQMKKLQIATCQNQ 615
           P+   PS  L KA+ +DF + +N +   +      +GSGW WLGYNK+ K LQIA C NQ
Sbjct: 115 PDRSDPSAELQKALNRDFQNMENFKKEMKAAAVAVQGSGWAWLGYNKKTKLLQIAACPNQ 174

Query: 616 DPLQATTGLV 645
           DPL+ATTGLV
Sbjct: 175 DPLEATTGLV 184



 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 185 RQKHTLPELPYEYNALEPVISRE 253
           R KHTLP+LPY++ ALEPVI RE
Sbjct: 31  RSKHTLPDLPYDFGALEPVICRE 53


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 265 HHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGG 399
           HH +HHA   ++    +   +   + GD  + + +A AL   GGG
Sbjct: 723 HHHQHHAAPHHHSLQQQHASSAFNSAGDARSGVAVAAALNTGGGG 767


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 229 TGAGH*P*NMSLHHSKHHATYINN 300
           +GA H   N +LHH  HH  + NN
Sbjct: 110 SGALHLGQNPNLHHHHHHHHHGNN 133


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 170 VAGASRQKHTLPELPYEYNALEPV 241
           +AG +R  HT+ +L  EY    P+
Sbjct: 65  IAGIARVYHTIKQLKSEYKTKNPL 88


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 170 VAGASRQKHTLPELPYEYNALEPV 241
           +AG +R  HT+ +L  EY    P+
Sbjct: 65  IAGIARVYHTIKQLKSEYKTKNPL 88


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +2

Query: 335 KLKVISTPLSTLHQP*NSMVVVTSTTRSFGTTCHQMVASLL 457
           K+ ++  PL+ + Q  ++ + +T T   +   CH + A  L
Sbjct: 161 KISLVVYPLAMIAQTASAYLTLTVTLERYVAVCHPLRARAL 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,569
Number of Sequences: 2352
Number of extensions: 13034
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)