Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0562
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64062-1|CAA45418.1|  143|Drosophila melanogaster superoxide dis...   172   4e-43
L34276-1|AAA28694.1|  217|Drosophila melanogaster manganese supe...   172   4e-43
L18947-1|AAA20533.1|  217|Drosophila melanogaster Mn-superoxide ...   172   4e-43
BT004505-1|AAO42669.1|  217|Drosophila melanogaster GH02759p pro...   172   4e-43
AE013599-2339|AAF57955.1|  217|Drosophila melanogaster CG8905-PA...   172   4e-43
AY084207-1|AAL89945.1| 1282|Drosophila melanogaster SD03956p pro...    29   7.1  
AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p pro...    29   7.1  
AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-P...    29   7.1  

>X64062-1|CAA45418.1|  143|Drosophila melanogaster superoxide
           dismutase (Mn type) protein.
          Length = 143

 Score =  172 bits (418), Expect = 4e-43
 Identities = 75/130 (57%), Positives = 95/130 (73%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLS 435
           M LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+IFW NLS
Sbjct: 7   MELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLS 66

Query: 436 PNGGKPSDVLTKAVEKDFGSWDNLRINCRQLLWQYRGSGWGWLGYNKQMKKLQIATCQNQ 615
           PN  +PSD L KA+E  + S +  +     L    +GSGWGWLG+NK+  KLQ+A   NQ
Sbjct: 67  PNKTQPSDDLKKAIESQWKSLEEFKKEVTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQ 126

Query: 616 DPLQATTGLV 645
           DPL+A+TGL+
Sbjct: 127 DPLEASTGLI 136


>L34276-1|AAA28694.1|  217|Drosophila melanogaster manganese
           superoxide dismutase protein.
          Length = 217

 Score =  172 bits (418), Expect = 4e-43
 Identities = 75/130 (57%), Positives = 95/130 (73%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLS 435
           M LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+IFW NLS
Sbjct: 40  MELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLS 99

Query: 436 PNGGKPSDVLTKAVEKDFGSWDNLRINCRQLLWQYRGSGWGWLGYNKQMKKLQIATCQNQ 615
           PN  +PSD L KA+E  + S +  +     L    +GSGWGWLG+NK+  KLQ+A   NQ
Sbjct: 100 PNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQ 159

Query: 616 DPLQATTGLV 645
           DPL+A+TGL+
Sbjct: 160 DPLEASTGLI 169



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 179 ASRQKHTLPELPYEYNALEPVISRE 253
           A R KHTLP+LPY+Y ALEP+I RE
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICRE 38


>L18947-1|AAA20533.1|  217|Drosophila melanogaster Mn-superoxide
           dismutase protein.
          Length = 217

 Score =  172 bits (418), Expect = 4e-43
 Identities = 75/130 (57%), Positives = 95/130 (73%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLS 435
           M LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+IFW NLS
Sbjct: 40  MELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLS 99

Query: 436 PNGGKPSDVLTKAVEKDFGSWDNLRINCRQLLWQYRGSGWGWLGYNKQMKKLQIATCQNQ 615
           PN  +PSD L KA+E  + S +  +     L    +GSGWGWLG+NK+  KLQ+A   NQ
Sbjct: 100 PNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQ 159

Query: 616 DPLQATTGLV 645
           DPL+A+TGL+
Sbjct: 160 DPLEASTGLI 169



 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 185 RQKHTLPELPYEYNALEPVISRE 253
           R KHTLP+LPY+Y ALEP+I RE
Sbjct: 16  RGKHTLPKLPYDYAALEPIICRE 38


>BT004505-1|AAO42669.1|  217|Drosophila melanogaster GH02759p
           protein.
          Length = 217

 Score =  172 bits (418), Expect = 4e-43
 Identities = 75/130 (57%), Positives = 95/130 (73%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLS 435
           M LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+IFW NLS
Sbjct: 40  MELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLS 99

Query: 436 PNGGKPSDVLTKAVEKDFGSWDNLRINCRQLLWQYRGSGWGWLGYNKQMKKLQIATCQNQ 615
           PN  +PSD L KA+E  + S +  +     L    +GSGWGWLG+NK+  KLQ+A   NQ
Sbjct: 100 PNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQ 159

Query: 616 DPLQATTGLV 645
           DPL+A+TGL+
Sbjct: 160 DPLEASTGLI 169



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 179 ASRQKHTLPELPYEYNALEPVISRE 253
           A R KHTLP+LPY+Y ALEP+I RE
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICRE 38


>AE013599-2339|AAF57955.1|  217|Drosophila melanogaster CG8905-PA
           protein.
          Length = 217

 Score =  172 bits (418), Expect = 4e-43
 Identities = 75/130 (57%), Positives = 95/130 (73%)
 Frame = +1

Query: 256 MSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLS 435
           M LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+IFW NLS
Sbjct: 40  MELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLS 99

Query: 436 PNGGKPSDVLTKAVEKDFGSWDNLRINCRQLLWQYRGSGWGWLGYNKQMKKLQIATCQNQ 615
           PN  +PSD L KA+E  + S +  +     L    +GSGWGWLG+NK+  KLQ+A   NQ
Sbjct: 100 PNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQ 159

Query: 616 DPLQATTGLV 645
           DPL+A+TGL+
Sbjct: 160 DPLEASTGLI 169



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 179 ASRQKHTLPELPYEYNALEPVISRE 253
           A R KHTLP+LPY+Y ALEP+I RE
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICRE 38


>AY084207-1|AAL89945.1| 1282|Drosophila melanogaster SD03956p protein.
          Length = 1282

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 174  PVLLARSILCQSFRTSTMHWSRSLAVKHESSSQQTSRDLYQQS 302
            P   + S +C +  T+T+H    L V + SSS  +S + YQ +
Sbjct: 1008 PAHASASSVCSAATTATVHNGSHLHVLNASSSTHSSNNFYQNT 1050


>AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p protein.
          Length = 2119

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 174  PVLLARSILCQSFRTSTMHWSRSLAVKHESSSQQTSRDLYQQS 302
            P   + S +C +  T+T+H    L V + SSS  +S + YQ +
Sbjct: 1845 PAHASASSVCSAATTATVHNGSHLHVLNASSSTHSSNNFYQNT 1887


>AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-PA
            protein.
          Length = 2119

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 174  PVLLARSILCQSFRTSTMHWSRSLAVKHESSSQQTSRDLYQQS 302
            P   + S +C +  T+T+H    L V + SSS  +S + YQ +
Sbjct: 1845 PAHASASSVCSAATTATVHNGSHLHVLNASSSTHSSNNFYQNT 1887


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,704,975
Number of Sequences: 53049
Number of extensions: 627682
Number of successful extensions: 1537
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)