Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0562
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   0.47 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   0.47 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   0.47 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   4.4  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 442 HLVTGCAKRSSG*CDHH 392
           H VTGC +R+ G C H+
Sbjct: 128 HPVTGCGERTEGRCLHY 144


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 442 HLVTGCAKRSSG*CDHH 392
           H VTGC +R+ G C H+
Sbjct: 133 HPVTGCGERTEGRCLHY 149


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 442 HLVTGCAKRSSG*CDHH 392
           H VTGC +R+ G C H+
Sbjct: 133 HPVTGCGERTEGRCLHY 149


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
 Frame = +1

Query: 445 GKPSDVL---TKAVEKDFGSWDNL 507
           GK  +V+   TKA+     SWDN+
Sbjct: 136 GKTDEVVFRQTKAIANKINSWDNV 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,146
Number of Sequences: 438
Number of extensions: 3482
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)