Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0560
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001762-1|AAN71517.1|  834|Drosophila melanogaster RH07443p pro...    28   9.4  
AY061062-1|AAL28610.1|  794|Drosophila melanogaster LD03322p pro...    28   9.4  
AF099028-1|AAD12254.1|  794|Drosophila melanogaster putative tra...    28   9.4  
AE013599-711|AAF59046.2|  794|Drosophila melanogaster CG8739-PA,...    28   9.4  
AE013599-710|AAX52723.1|  834|Drosophila melanogaster CG8739-PC,...    28   9.4  
AE013599-709|AAF59047.2|  820|Drosophila melanogaster CG8739-PB,...    28   9.4  

>BT001762-1|AAN71517.1|  834|Drosophila melanogaster RH07443p
           protein.
          Length = 834

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 NWNLFTTKSFIKLPNNETIARDYHRNYHLYFNK 422
           N  +  T SF+K  N       YHR Y  + +K
Sbjct: 140 NLKIMATNSFVKFANINEDTPSYHRRYDFFISK 172


>AY061062-1|AAL28610.1|  794|Drosophila melanogaster LD03322p
           protein.
          Length = 794

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 NWNLFTTKSFIKLPNNETIARDYHRNYHLYFNK 422
           N  +  T SF+K  N       YHR Y  + +K
Sbjct: 114 NLKIMATNSFVKFANINEDTPSYHRRYDFFISK 146


>AF099028-1|AAD12254.1|  794|Drosophila melanogaster putative
           transmembrane proteincmp44E protein.
          Length = 794

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 NWNLFTTKSFIKLPNNETIARDYHRNYHLYFNK 422
           N  +  T SF+K  N       YHR Y  + +K
Sbjct: 114 NLKIMATNSFVKFANINEDTPSYHRRYDFFISK 146


>AE013599-711|AAF59046.2|  794|Drosophila melanogaster CG8739-PA,
           isoform A protein.
          Length = 794

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 NWNLFTTKSFIKLPNNETIARDYHRNYHLYFNK 422
           N  +  T SF+K  N       YHR Y  + +K
Sbjct: 114 NLKIMATNSFVKFANINEDTPSYHRRYDFFISK 146


>AE013599-710|AAX52723.1|  834|Drosophila melanogaster CG8739-PC,
           isoform C protein.
          Length = 834

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 NWNLFTTKSFIKLPNNETIARDYHRNYHLYFNK 422
           N  +  T SF+K  N       YHR Y  + +K
Sbjct: 140 NLKIMATNSFVKFANINEDTPSYHRRYDFFISK 172


>AE013599-709|AAF59047.2|  820|Drosophila melanogaster CG8739-PB,
           isoform B protein.
          Length = 820

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 NWNLFTTKSFIKLPNNETIARDYHRNYHLYFNK 422
           N  +  T SF+K  N       YHR Y  + +K
Sbjct: 140 NLKIMATNSFVKFANINEDTPSYHRRYDFFISK 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,051,341
Number of Sequences: 53049
Number of extensions: 349589
Number of successful extensions: 607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)