Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0559
(635 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 30 0.071
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 30 0.071
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 27 0.50
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 27 0.66
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 27 0.66
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 26 0.87
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 26 0.87
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.0
AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase... 24 3.5
AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase... 24 3.5
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 8.1
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 8.1
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 29.9 bits (64), Expect = 0.071
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 248 PLSLASWS--PIAPTWTTSATGWCSRAASRDTPSPRSPGSTDRMCPLKRTRA*RCF---A 412
P + +WS P PT TT+ T W A+ TP+P + + + P T +
Sbjct: 168 PTTTTTWSDQPPPPT-TTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPT 226
Query: 413 RASWSYPPSSGATWTSTLAKPKT 481
+ ++ P++ TW+ P T
Sbjct: 227 ATTTTHAPTTTTTWSDQPPPPPT 249
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 29.9 bits (64), Expect = 0.071
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 248 PLSLASWS--PIAPTWTTSATGWCSRAASRDTPSPRSPGSTDRMCPLKRTRA*RCF---A 412
P + +WS P PT TT+ T W A+ TP+P + + + P T +
Sbjct: 168 PTTTTTWSDQPPPPT-TTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPT 226
Query: 413 RASWSYPPSSGATWTSTLAKPKT 481
+ ++ P++ TW+ P T
Sbjct: 227 ATTTTHAPTTTTTWSDLPPPPPT 249
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.1 bits (57), Expect = 0.50
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +2
Query: 248 PLSLASWS--PIAPTWTTSATGWCSRAASRDTPSPRSPGSTDRMCPLKRTRA*RCF---A 412
P + +WS P PT TT+ T W A+ TP+ + + + P T +
Sbjct: 168 PTTTTTWSDQPPPPT-TTTTTVWTDSTATTTTPASTTTTTWSDLPPPPPTTTTTVWIDPT 226
Query: 413 RASWSYPPSSGATWTSTLAKPKT 481
+ ++ P++ TW+ P T
Sbjct: 227 ATTTTHAPTTTTTWSDLPPPPPT 249
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 26.6 bits (56), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 426 DQLARAKHLHARVLFNGHILSVEPGDLGLGVSLDAA 319
D RA H H V+ +G + ++P DL +G + AA
Sbjct: 249 DPQRRAPHSHHLVIKSGELDLIDPHDLDVGGAAGAA 284
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 26.6 bits (56), Expect = 0.66
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +2
Query: 248 PLSLASWS--PIAPTWTTSATGWCSRAASRDTPSPRSPGSTDRMCPLKRTRA*RCF---A 412
P + +WS P PT TT+ T W A+ TP+ + + + P T +
Sbjct: 167 PTTTTTWSDQPPPPT-TTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPTTTTTVWIDPT 225
Query: 413 RASWSYPPSSGATWTSTLAKPKT 481
+ ++ P++ TW+ P T
Sbjct: 226 ATTTTHAPTTTTTWSDLPPPPPT 248
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 26.2 bits (55), Expect = 0.87
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +2
Query: 248 PLSLASWS--PIAPTWTTSATGWCSRAASRDTPSPRSPGSTDRMCPLKRTRA*RCF---A 412
P + +WS P PT TT+ T W A+ TP+ + + + P T +
Sbjct: 167 PTTTTTWSDQPPPPT-TTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPTTTTTVWIDPT 225
Query: 413 RASWSYPPSSGATWTSTLAKPKT 481
+ ++ P++ TW+ P T
Sbjct: 226 ATTTTHVPTTTTTWSDLPPPPPT 248
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 26.2 bits (55), Expect = 0.87
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 244 VPAEPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKI 351
+ A PRI Y+ G++ ++ +++ + KPKI
Sbjct: 690 IKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKPKI 725
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.0 bits (52), Expect = 2.0
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 312 APVPRQGTPQAQDHLVQRTECAH*KEPAHEGASLGRAGHILPPLERHGRVHLPSRKR 482
+P P + AQ Q+ H H LG H LPP G V P +++
Sbjct: 74 SPAPPVLSSSAQQQQQQQQLLHHPSSSPHSNHLLGGPNHHLPPGASPGLVPPPQQQQ 130
>AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase
isoform 2 protein.
Length = 484
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 265 VVSY-STYVDNIGNRVVLPCRVKGHPKPKI 351
+V Y S Y++NI +R VLP G+ +P I
Sbjct: 23 MVDYISNYLENIRDRRVLPTVQPGYLRPLI 52
>AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase
isoform 1 protein.
Length = 515
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 265 VVSY-STYVDNIGNRVVLPCRVKGHPKPKI 351
+V Y S Y++NI +R VLP G+ +P I
Sbjct: 54 MVDYISNYLENIRDRRVLPTVQPGYLRPLI 83
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.0 bits (47), Expect = 8.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 402 LHARVLFNGHILSVEPGDLGLGVSLDAAREHHPVADVV--HVGAIG 271
L R +N + +S+EPG L + + A P+A VV H G G
Sbjct: 1652 LQKRAKWNKNAISIEPGRLVILQEDNVAVSKWPMARVVDLHPGKDG 1697
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.0 bits (47), Expect = 8.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 632 AVCTGPYRIRTYLTEHP 582
A C GP+RI EHP
Sbjct: 520 AACGGPHRIGHMSCEHP 536
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,254
Number of Sequences: 2352
Number of extensions: 11417
Number of successful extensions: 50
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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