Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0558
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.011
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   2.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.8  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 0.011
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 414 FFILFYLHNIFLFANLGLYYFFNYHKI--CIFLIFFVIIQISLILY 283
           F+  F L  + L   + +YYF+  H +  C F+IF + +   L +Y
Sbjct: 241 FYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIY 286



 Score = 26.2 bits (55), Expect = 0.13
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 414 FFILFYLHNIFLFANLGLYYFFNYHKICIFLIFFVIIQISLILY 283
           F +  Y   + LF  L +YYF+     C F+IF V +   L +Y
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFY-----CAFIIFTVHLLFLLCIY 167



 Score = 24.2 bits (50), Expect = 0.53
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 411 FILFYLHNIFLFANLGLYYFFNYHKICIFLIF 316
           FI+F +H +FL   L +Y+FF     C F+IF
Sbjct: 153 FIIFTVHLLFL---LCIYHFF-----CAFIIF 176


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 423 LTSFFILFYLHNIFLFANLGLYYFFNYHKICIFLIFFVIIQI 298
           LTS   L    N +++A   +++FF    IC   I  +++ I
Sbjct: 54  LTSSVTLHVCFNSYMYAFTHIFFFF---AICCDFIALIVVNI 92



 Score = 22.6 bits (46), Expect = 1.6
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 369 LGLYYFFNYHKICIFLIFFVI-IQISLILYVSV 274
           L +Y+   Y K C  L +F+I I +  IL  SV
Sbjct: 26  LKIYHKEKYRKFCRILKYFIIAIYVLTILTSSV 58


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 175 NKIILLQFSTIPKY-CSKNLWNLFLIVSR 92
           NK++LL  ST P Y    N  N +L++++
Sbjct: 6   NKLLLLDSSTQPNYLILSNKNNTYLVLNK 34



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 256 FYS*FIKLNYSYTLLSLRKLA 194
           FYS F  L+Y YT  S RKL+
Sbjct: 84  FYSYFFYLSYIYTTYS-RKLS 103


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 256 FYS*FIKLNYSYTLLSLRKLA 194
           FYS F  L+Y YT  S RKL+
Sbjct: 40  FYSYFFYLSYIYTTYS-RKLS 59


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 372 NLGLYYFFNYHKICIFLIFFVII 304
           +L  +YFF   +  +  + FVII
Sbjct: 16  SLDAFYFFETEQFTLLWVLFVII 38


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 363 LYYFFNYHKICIFLIFFVIIQISL 292
           LYYFFN    C+ +    ++  +L
Sbjct: 212 LYYFFNLIVPCVLISSMALLGFTL 235


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 363 LYYFFNYHKICIFLIFFVIIQISL 292
           LYYFFN    C+ +    ++  +L
Sbjct: 212 LYYFFNLIVPCVLISSMALLGFTL 235


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 363 LYYFFNYHKICIFLIFFVIIQISL 292
           LYYFFN    C+ +    ++  +L
Sbjct: 212 LYYFFNLIVPCVLISSMALLGFTL 235


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 363 LYYFFNYHKICIFLIFFVIIQISL 292
           LYYFFN    C+ +    ++  +L
Sbjct: 212 LYYFFNLIVPCVLISSMALLGFTL 235


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 363 LYYFFNYHKICIFLIFFVIIQISL 292
           LYYFFN    C+ +    ++  +L
Sbjct: 212 LYYFFNLIVPCVLISSMALLGFTL 235


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 345 YHKICIFLIFFVIIQISLILY 283
           Y    IFL F + + I LILY
Sbjct: 237 YFLTIIFLFFIIPLIILLILY 257


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -2

Query: 330 IFLIFFVIIQISLILYVSVKFL*LSFIVNLSNLITVIRC*A*GSLHT 190
           +FL+    +     LY +  +L +  ++N++  +  I C A G+  T
Sbjct: 142 VFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVGNAST 188


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -2

Query: 330 IFLIFFVIIQISLILYVSVKFL*LSFIVNLSNLITVIRC*A*GSLHT 190
           +FL+    +     LY +  +L +  ++N++  +  I C A G+  T
Sbjct: 142 VFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVGNAST 188


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -2

Query: 330 IFLIFFVIIQISLILYVSVKFL*LSFIVNLSNLITVIRC*A*GSLHT 190
           +FL+    +     LY +  +L +  ++N++  +  I C A G+  T
Sbjct: 142 VFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVGNAST 188


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 233 KFDKLTIKLNYKNFT 277
           KFD  T+ LN+  FT
Sbjct: 277 KFDLKTLVLNFPKFT 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,299
Number of Sequences: 336
Number of extensions: 1746
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)