Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0557
         (635 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    37   0.47 
UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_A3RKR3 Cluster: EMYB2; n=1; Euplotes aediculatus|Rep: E...    33   4.4  
UniRef50_UPI0000E45C7D Cluster: PREDICTED: similar to ADAM metal...    33   5.8  
UniRef50_Q9Z9F3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 36.7 bits (81), Expect = 0.47
 Identities = 17/26 (65%), Positives = 17/26 (65%)
 Frame = +3

Query: 99  MGDGNHSPSSGPCARTSARAKKKLLS 176
           MGDGNHSPS  P A    RAK KL S
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMKLTS 26


>UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 85

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 177 DSKVFFLPLQTYEHTAHLMVSGYHRPWTSTMPGAEP 70
           D+ +F +    +  T +L+   +   WTST+PGA+P
Sbjct: 23  DTFIFQIKFSCFRQTIYLVDDNHRHSWTSTIPGAQP 58


>UniRef50_A3RKR3 Cluster: EMYB2; n=1; Euplotes aediculatus|Rep:
           EMYB2 - Euplotes aediculatus
          Length = 472

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 145 VRAHGPLDGEWLPSPMDFN-NARCRAKWHNLLIPEAGGSRWS 23
           VR +GP +  ++ S ++     +CR +WHN L P+    +W+
Sbjct: 159 VRKYGPKNWSFVASKLNGRIGKQCRERWHNHLNPDINNEKWT 200


>UniRef50_UPI0000E45C7D Cluster: PREDICTED: similar to ADAM
            metallopeptidase with thrombospondin type 1 motif, 16
            preproprotein; n=1; Strongylocentrotus purpuratus|Rep:
            PREDICTED: similar to ADAM metallopeptidase with
            thrombospondin type 1 motif, 16 preproprotein -
            Strongylocentrotus purpuratus
          Length = 1202

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 65   PLGSAPGIVEVHGRW*PLTIKWAVCSYVCKGKKK 166
            P  S P ++EV GRW P   +W+ CS  C G  K
Sbjct: 1088 PCNSQPCMIEVRGRWQP--GEWSQCSATCDGGTK 1119


>UniRef50_Q9Z9F3 Cluster: Putative uncharacterized protein; n=1;
           Chlamydophila pneumoniae|Rep: Putative uncharacterized
           protein - Chlamydia pneumoniae (Chlamydophila
           pneumoniae)
          Length = 261

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 543 YSHGL*SCPRFKQTRNALRVYKRDQKEVQFKFGTLRACLF 424
           Y H L S P       AL  +K  Q+E+  K  T++AC F
Sbjct: 190 YFHSLVSVPNISGEERALNYHKEQQEEMAVKLKTMQACSF 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,571,500
Number of Sequences: 1657284
Number of extensions: 11061977
Number of successful extensions: 24590
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24587
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)