Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0557
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    28   0.28 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    28   0.28 
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        25   2.7  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      25   2.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.1  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
            protease protein.
          Length = 1322

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 20   VAPPGTSSLWYQKIVPLGSAPGIVE-VHGRW 109
            V PPG   +W  ++   G+ P I + VH  W
Sbjct: 980  VYPPGVGQIWLDQVACNGTEPSIEDCVHWHW 1010


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
            protein.
          Length = 1322

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 20   VAPPGTSSLWYQKIVPLGSAPGIVE-VHGRW 109
            V PPG   +W  ++   G+ P I + VH  W
Sbjct: 980  VYPPGVGQIWLDQVACNGTEPSIEDCVHWHW 1010


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +1

Query: 382 VKKGKRSRNTTVALKEARA*RAKFKLHFLLISLVH-AKSIPCLFKPWARSQSMAIRVLKT 558
           VKK  R R  TVAL+E R  +   +L    +      + I   FK   R QS A+  L+ 
Sbjct: 34  VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQE 93

Query: 559 NSK-FLKYAYSNIHTC 603
            S+ +L   + + + C
Sbjct: 94  ASEAYLVGLFEDTNLC 109


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +1

Query: 382 VKKGKRSRNTTVALKEARA*RAKFKLHFLLISLVH-AKSIPCLFKPWARSQSMAIRVLKT 558
           VKK  R R  TVAL+E R  +   +L    +      + I   FK   R QS AI  L+ 
Sbjct: 36  VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQE 95

Query: 559 NSK-FLKYAYSNIHTC 603
            S+ +L   + + + C
Sbjct: 96  ASEAYLVGLFEDTNLC 111


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 613 PTTSMYVCYYKRISRTLSSFSVLL*PW 533
           PTT+  +   + I R L+ +++ L PW
Sbjct: 909 PTTASSIARIEAIQRKLTRYALRLLPW 935


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,864
Number of Sequences: 2352
Number of extensions: 12558
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)