Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0557
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113554-1|AAI13555.1|  431|Homo sapiens galactose-3-O-sulfotran...    31   3.4  
BC113552-1|AAI13553.1|  431|Homo sapiens galactose-3-O-sulfotran...    31   3.4  
AY026481-1|AAK01945.1|  431|Homo sapiens beta-galactose-3-O-sulf...    31   3.4  
AB053232-1|BAB61900.1|  431|Homo sapiens galactose-3-O-sulfotran...    31   3.4  
AK000696-1|BAA91325.1|  453|Homo sapiens protein ( Homo sapiens ...    30   7.9  

>BC113554-1|AAI13555.1|  431|Homo sapiens
           galactose-3-O-sulfotransferase 3 protein.
          Length = 431

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 633 RADSQEVLPPACMYVTISVFQEL*VRFQYSYSHGL*SCPRFKQTRNA 493
           RA+ + ++PP+ +YVTI   +E    F+  +S+    CP F++  NA
Sbjct: 134 RAELERLMPPSTVYVTI--LREPAAMFESLFSYYNQYCPAFRRVPNA 178


>BC113552-1|AAI13553.1|  431|Homo sapiens
           galactose-3-O-sulfotransferase 3 protein.
          Length = 431

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 633 RADSQEVLPPACMYVTISVFQEL*VRFQYSYSHGL*SCPRFKQTRNA 493
           RA+ + ++PP+ +YVTI   +E    F+  +S+    CP F++  NA
Sbjct: 134 RAELERLMPPSTVYVTI--LREPAAMFESLFSYYNQYCPAFRRVPNA 178


>AY026481-1|AAK01945.1|  431|Homo sapiens
           beta-galactose-3-O-sulfotransferase 3 protein.
          Length = 431

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 633 RADSQEVLPPACMYVTISVFQEL*VRFQYSYSHGL*SCPRFKQTRNA 493
           RA+ + ++PP+ +YVTI   +E    F+  +S+    CP F++  NA
Sbjct: 134 RAELERLMPPSTVYVTI--LREPAAMFESLFSYYNQYCPAFRRVPNA 178


>AB053232-1|BAB61900.1|  431|Homo sapiens
           galactose-3-O-sulfotransferase protein.
          Length = 431

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 633 RADSQEVLPPACMYVTISVFQEL*VRFQYSYSHGL*SCPRFKQTRNA 493
           RA+ + ++PP+ +YVTI   +E    F+  +S+    CP F++  NA
Sbjct: 134 RAELERLMPPSTVYVTI--LREPAAMFESLFSYYNQYCPAFRRVPNA 178


>AK000696-1|BAA91325.1|  453|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20689 fis, clone KAIA2890. ).
          Length = 453

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 448 KFKLHFLLISLVHAKSIPCL-FKPW 519
           ++ L FL   LVH  SIPCL F PW
Sbjct: 355 RWLLIFLTFLLVHMSSIPCLPFTPW 379


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,420,107
Number of Sequences: 237096
Number of extensions: 1732815
Number of successful extensions: 3213
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3213
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)