Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0557
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    25   0.81 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.3  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   4.3  

>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 486 VYKRDQKEVQFKFGTLRACLFQ 421
           +Y+ + +E   KFG   AC+FQ
Sbjct: 40  MYEANSEEQMKKFGCFEACVFQ 61


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 392 PFLTYVRLNGLWS 354
           PF  YV +NG WS
Sbjct: 241 PFAVYVLVNGSWS 253


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 231 KELNKELNNLQYLEIMRDDSKVFFLPLQTY 142
           ++ +  +NN   LE  R+D K F + ++ Y
Sbjct: 464 EQFDTTINNGLLLEEQRNDDKPFLIKIRQY 493


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 231 KELNKELNNLQYLEIMRDDSKVFFLPLQTY 142
           ++ +  +NN   LE  R+D K F + ++ Y
Sbjct: 464 EQFDTTINNGLLLEEQRNDDKPFLIKIRQY 493


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 486 VYKRDQKEVQFKFGTLRACLFQ 421
           +Y+ + +E   K G   AC+FQ
Sbjct: 40  MYESNSEEQMKKLGCFEACVFQ 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,496
Number of Sequences: 438
Number of extensions: 3427
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)