Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0555
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.6  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    24   4.5  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    24   4.5  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 472 RDQSFIRNALYEVVKRVI 419
           RDQSF+RN  Y +V+ ++
Sbjct: 812 RDQSFLRNLYYALVRPLL 829


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 163 LCLLESVPIQIDLTSQGHYYYDLF 92
           +CL+ + P+ + L   G  YY++F
Sbjct: 217 MCLMYTFPLIVILYCYGSIYYEIF 240


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 163 LCLLESVPIQIDLTSQGHYYYDLF 92
           +CL+ + P+ + L   G  YY++F
Sbjct: 217 MCLMYTFPLIVILYCYGSIYYEIF 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,928
Number of Sequences: 2352
Number of extensions: 11998
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)