Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0553
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 152 5e-36
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 147 2e-34
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 138 7e-32
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 138 9e-32
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 138 1e-31
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 137 2e-31
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 134 1e-30
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 133 3e-30
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 132 8e-30
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 131 1e-29
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 129 4e-29
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 127 2e-28
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 125 7e-28
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 123 3e-27
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 122 8e-27
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 112 7e-24
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 110 2e-23
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 109 6e-23
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 107 2e-22
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 107 2e-22
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 106 4e-22
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 95 3e-21
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 102 7e-21
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 101 2e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 99 9e-20
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 98 2e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 95 8e-19
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 1e-18
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 95 1e-18
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 92 8e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 92 1e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 91 2e-17
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 91 2e-17
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 89 5e-17
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 89 7e-17
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 89 9e-17
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 88 2e-16
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 87 2e-16
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 87 3e-16
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 87 4e-16
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 86 5e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 86 5e-16
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 85 9e-16
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 83 6e-15
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 83 6e-15
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 82 8e-15
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 82 8e-15
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 82 1e-14
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 82 1e-14
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 81 2e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 79 6e-14
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 79 6e-14
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 78 1e-13
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 78 2e-13
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 77 2e-13
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 77 3e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 76 7e-13
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 75 1e-12
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 75 2e-12
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 74 3e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 3e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 74 3e-12
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 73 4e-12
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 73 6e-12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 1e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 70 3e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 70 3e-11
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 70 3e-11
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 70 5e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 6e-11
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 69 6e-11
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 69 8e-11
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 69 1e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 67 2e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 66 4e-10
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 66 6e-10
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 65 1e-09
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 63 4e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 62 9e-09
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 60 3e-08
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 56 8e-07
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 56 8e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 53 4e-06
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 44 0.002
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 44 0.003
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 44 0.003
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 42 0.014
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.014
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 41 0.024
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 40 0.032
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 40 0.042
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 40 0.056
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.056
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 38 0.13
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.13
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 38 0.17
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 38 0.23
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.52
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 36 0.91
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 0.91
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 0.91
UniRef50_Q5KZD0 Cluster: Cytochrome c oxidase (B(O/a)3-type) cha... 35 1.2
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 1.2
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 35 1.2
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 1.2
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 35 1.6
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 3.7
UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 33 4.9
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 6.4
UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY0608... 32 8.5
UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA - Su... 32 8.5
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 152 bits (369), Expect = 5e-36
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV+LANS
Sbjct: 6 RAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGVVLANS 65
Query: 181 SIDITLHDTYYVVAHFHYVLSIGA 252
S+DI LHDTYYVVAHFHYVLS+GA
Sbjct: 66 SLDIVLHDTYYVVAHFHYVLSMGA 89
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +2
Query: 257 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 436
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS LI
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 437 YFMK 448
+K
Sbjct: 152 LLLK 155
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 147 bits (356), Expect = 2e-34
Identities = 71/85 (83%), Positives = 76/85 (89%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANS
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANS 274
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
SIDI LHDTYYVVAHFHYVLS+GAV
Sbjct: 275 SIDIVLHDTYYVVAHFHYVLSMGAV 299
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 374
AI+ G + +PLFTG++LN++ LKIQF +FIGVN+TFF
Sbjct: 301 AIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 138 bits (335), Expect = 7e-32
Identities = 61/85 (71%), Positives = 76/85 (89%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LANS
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANS 361
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+DI LHDTYYVVAHFHYVLS+GAV
Sbjct: 362 SLDIVLHDTYYVVAHFHYVLSMGAV 386
Score = 91.1 bits (216), Expect = 2e-17
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI+GGFI+ +PLF+G +L+ KI F +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 388 AIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 138 bits (334), Expect = 9e-32
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+ILANS
Sbjct: 67 RAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGIILANS 126
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+DI LHDTYYVVAHFHYVLS+GAV
Sbjct: 127 SLDIVLHDTYYVVAHFHYVLSMGAV 151
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFI 353
AI+GGF++ +PLF+G +L++ KI F +F+
Sbjct: 153 AIMGGFVHWFPLFSGYTLHNTWTKIHFGVMFM 184
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 138 bits (333), Expect = 1e-31
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANS
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANS 361
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
SIDI LHDTYYVVAHFHYVLS+GAV
Sbjct: 362 SIDIVLHDTYYVVAHFHYVLSMGAV 386
Score = 90.2 bits (214), Expect = 3e-17
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI+ GF++ +PLFTG +L+ KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 388 AIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 137 bits (331), Expect = 2e-31
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANS
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANS 361
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+DI LHDTYYVVAHFHYVLS+GAV
Sbjct: 362 SLDIVLHDTYYVVAHFHYVLSMGAV 386
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI+ GF++ +PLFTG +LNS KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 388 AIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 134 bits (325), Expect = 1e-30
Identities = 63/85 (74%), Positives = 73/85 (85%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLTG++LANS
Sbjct: 303 RAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANS 362
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+DI LHDTYYVVAHFHYVLS+GAV
Sbjct: 363 SLDIALHDTYYVVAHFHYVLSMGAV 387
Score = 87.4 bits (207), Expect = 2e-16
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI+ GF + +PLFTG +LN+ K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 389 AILAGFTHWFPLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 133 bits (321), Expect = 3e-30
Identities = 60/85 (70%), Positives = 75/85 (88%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN+
Sbjct: 302 RAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLANA 361
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+DI HDTYYVVAHFHYVLS+GAV
Sbjct: 362 SLDIAFHDTYYVVAHFHYVLSMGAV 386
Score = 69.3 bits (162), Expect = 6e-11
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
A+ G+ P GL N K F+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 388 ALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 132 bits (318), Expect = 8e-30
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GGLTG++LANS
Sbjct: 279 RAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTGIVLANS 338
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
SID+ LHDTYYVVAHFHYVLS+GAV
Sbjct: 339 SIDVVLHDTYYVVAHFHYVLSMGAV 363
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 131 bits (316), Expect = 1e-29
Identities = 60/85 (70%), Positives = 72/85 (84%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++LANS
Sbjct: 304 RAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANS 363
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+DI LHDTYYVVAHFHYVLS+GAV
Sbjct: 364 GLDIALHDTYYVVAHFHYVLSMGAV 388
Score = 59.3 bits (137), Expect = 6e-08
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
A+ GF G + + +I F+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 390 ALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 129 bits (312), Expect = 4e-29
Identities = 60/85 (70%), Positives = 72/85 (84%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NS
Sbjct: 286 RAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNS 345
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+D+ LHDTYY VAHFHYVLS+GAV
Sbjct: 346 SVDVVLHDTYYGVAHFHYVLSMGAV 370
Score = 94.3 bits (224), Expect = 2e-18
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
+I+GGFI +P+F GL +N Y LKI F+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 372 SILGGFIYWFPMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPD 429
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 127 bits (306), Expect = 2e-28
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG++LANS
Sbjct: 309 RAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLANS 368
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+DI+LHDTYYVVAHFHYVLS+GAV
Sbjct: 369 GLDISLHDTYYVVAHFHYVLSMGAV 393
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI GF + TGL + +I F++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 395 AIFAGFYYWFGKITGLQYPETLGQIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 125 bits (302), Expect = 7e-28
Identities = 60/87 (68%), Positives = 73/87 (83%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILA 174
RAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLFT+GGLTG++L+
Sbjct: 267 RAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLS 326
Query: 175 NSSIDITLHDTYYVVAHFHYVLSIGAV 255
NSS+DI LHDTYYVVAHFHYVLS+GAV
Sbjct: 327 NSSLDILLHDTYYVVAHFHYVLSMGAV 353
Score = 75.8 bits (178), Expect = 7e-13
Identities = 34/58 (58%), Positives = 41/58 (70%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI GGF + TG + I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 355 AIFGGFYLWFGKITGYAYKDIYGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 123 bits (297), Expect = 3e-27
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
+ YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN
Sbjct: 344 KMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANG 403
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+D LHDTYYVVAHFHYVLS+GAV
Sbjct: 404 GVDDVLHDTYYVVAHFHYVLSLGAV 428
Score = 67.3 bits (157), Expect = 2e-10
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
+ GF +P +G N ++ ++ F+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 431 LFAGFYYWFPKMSGKMYNEFLGQLHFWVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 122 bits (293), Expect = 8e-27
Identities = 55/85 (64%), Positives = 71/85 (83%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN+
Sbjct: 328 RAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLANA 387
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S +I HDTYYVVAHFHYVLS+GAV
Sbjct: 388 SENIAFHDTYYVVAHFHYVLSMGAV 412
Score = 73.3 bits (172), Expect = 4e-12
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
A+ G+ P GLS ++ KI F+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 414 ALFSGWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 112 bits (269), Expect = 7e-24
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVIL 171
RAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V LFT+GGLTGVIL
Sbjct: 305 RAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVIL 364
Query: 172 ANSSIDITLHDTYYVVAHFHYVLSIGAV 255
AN+++ LHD+YYVVAHFHYVLS+GAV
Sbjct: 365 ANAALSTLLHDSYYVVAHFHYVLSMGAV 392
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI GGF +P +TG+ ++ F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 394 AIFGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 110 bits (265), Expect = 2e-23
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILAN 177
+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG+IL+N
Sbjct: 305 KAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSN 363
Query: 178 SSIDITLHDTYYVVAHFHYVLSIGAV 255
+ ID ++HDT+YVV HFHYVLS+GAV
Sbjct: 364 AGIDTSIHDTHYVVGHFHYVLSMGAV 389
Score = 66.9 bits (156), Expect = 3e-10
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI GGF + TGLS + + + F+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 391 AIYGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 109 bits (261), Expect = 6e-23
Identities = 49/85 (57%), Positives = 66/85 (77%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
+AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ +
Sbjct: 407 QAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQA 466
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+D HDTYYVVAHFHYV+S+GAV
Sbjct: 467 GVDRAYHDTYYVVAHFHYVMSLGAV 491
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 327 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
++ F+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 516 QVHFWVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 107 bits (256), Expect = 2e-22
Identities = 70/154 (45%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG +N
Sbjct: 5 RAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN---WSNF 61
Query: 181 SIDITLH--DTYYVVAHFHYVL--SIGAVXXXXXXXXXXXXXXXAFH*ILIY*KFNFLQY 348
S+ I + Y+++ +++ +G F + KFN Y
Sbjct: 62 SLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFNLQLY 121
Query: 349 LLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI 450
LE I HF HNIF EYLDDIQI + E+
Sbjct: 122 FLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEM 155
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 107 bits (256), Expect = 2e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G+IL+ +
Sbjct: 312 RTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSAA 371
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+DI LHDTYYVVAHFHY LS+GA+
Sbjct: 372 SLDIILHDTYYVVAHFHYTLSLGAI 396
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
I GF P G+S +S ++ F F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 399 IFCGFCLWLPYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 106 bits (254), Expect = 4e-22
Identities = 47/63 (74%), Positives = 56/63 (88%)
Frame = +1
Query: 67 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSI 246
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS+
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSM 384
Query: 247 GAV 255
GAV
Sbjct: 385 GAV 387
Score = 88.6 bits (210), Expect = 9e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
AI+ GF + +PLFTG +LNS K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 389 AILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 94.7 bits (225), Expect(2) = 3e-21
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 14/88 (15%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL-------- 156
RAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT+GGL
Sbjct: 361 RAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLLNHLLWKI 420
Query: 157 ------TGVILANSSIDITLHDTYYVVA 222
+GV+LAN+S+DI HDTYYVVA
Sbjct: 421 NKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 69.7 bits (163), Expect = 5e-11
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
A+ G+ P G + + + K+QF+ +FIGVN TFFPQHFLGL G+PRR SDYPD
Sbjct: 495 AMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQHFLGLQGMPRRISDYPD 552
Score = 29.5 bits (63), Expect(2) = 3e-21
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 202 DTYYVVAHFHYVLSIGAV 255
+T + HFHYVLS+GAV
Sbjct: 476 ETMLFIVHFHYVLSMGAV 493
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 102 bits (244), Expect = 7e-21
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGLTGVILA 174
RA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT GG TGVIL
Sbjct: 11 RAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGTTGVILG 69
Query: 175 NSSIDITLHDTYYVVAHFHYVLSIGAV 255
N +ID+ LHDTYYV+AHFH+VLSIGA+
Sbjct: 70 NGAIDVALHDTYYVIAHFHFVLSIGAI 96
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 294 FTGLSLN-SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
F G +L + I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 110 FFGKTLRENTIIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 101 bits (241), Expect = 2e-20
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILAN 177
RAYFTS TI+I++PTG K+F + T + + + L L F+ FT GG TGVIL N
Sbjct: 307 RAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGN 366
Query: 178 SSIDITLHDTYYVVAHFHYVLSIGAV 255
++ID+ LHDTYYV+AHFH+VLSIGA+
Sbjct: 367 AAIDVALHDTYYVIAHFHFVLSIGAI 392
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3
Query: 348 FIGVNITFFPQHFLGLAGIPRRYSDYPD 431
F+GV +TF P HFLG +PRR DYPD
Sbjct: 425 FVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 98.7 bits (235), Expect = 9e-20
Identities = 44/74 (59%), Positives = 59/74 (79%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV++ANS
Sbjct: 319 RAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIANS 378
Query: 181 SIDITLHDTYYVVA 222
S+DI HDTYYVVA
Sbjct: 379 SLDIMFHDTYYVVA 392
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFTVGGLTGVILAN 177
RAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT+GG TGV++ N
Sbjct: 15 RAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGTTGVVMGN 74
Query: 178 SSIDITLHDTYYVVAHFHYVLSIGAV 255
+ +DI LHDTYY+VAHFH+VLS+GA+
Sbjct: 75 AGMDIALHDTYYIVAHFHFVLSLGAI 100
Score = 37.9 bits (84), Expect = 0.17
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
+ G +N + + TG +S L I F + + F P H LG +PRR DYPD
Sbjct: 114 MFGDTLNLFHVNTG---SSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 95.5 bits (227), Expect = 8e-19
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGVILAN+
Sbjct: 301 RAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANA 360
Query: 181 SIDITLHDTYY 213
S+D+ LHD Y
Sbjct: 361 SLDVALHDLKY 371
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 168
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 94.7 bits (225), Expect = 1e-18
Identities = 44/83 (53%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILANSS 183
+F+S T+II VPTGIK+F L ++ + +P + +GF+FLFTVGG+TGV L+ S+
Sbjct: 394 FFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALSASA 453
Query: 184 IDITLHDTYYVVAHFHYVLSIGA 252
+DI HDT++VVAHFHYVLS+G+
Sbjct: 454 LDILFHDTWFVVAHFHYVLSLGS 476
Score = 53.6 bits (123), Expect = 3e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
+P G SLN Y+L+ + +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 488 WPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 92.3 bits (219), Expect = 8e-18
Identities = 41/85 (48%), Positives = 62/85 (72%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++LANS
Sbjct: 59 RVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLANS 117
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+D+ +HD+YYVVAHFHYVLS+GAV
Sbjct: 118 EVDLVMHDSYYVVAHFHYVLSLGAV 142
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
++ G ++ + L +G +++L++Q + G F+ H G G+PRR D PD
Sbjct: 145 LLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTTCIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 91.9 bits (218), Expect = 1e-17
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV+LAN+
Sbjct: 302 RAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLANA 361
Query: 181 SIDITLHD 204
S+D+ HD
Sbjct: 362 SLDVAFHD 369
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGLTGV++A+
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASV 371
Query: 181 SIDITLHDTYYVVAHFHYVLSIGA 252
DI +HDTY+VV HFHYVL G+
Sbjct: 372 PFDIHVHDTYFVVGHFHYVLFGGS 395
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
A+ G + +P TG +N + ++ F FIG+N+TF P H LGL G+ RR + Y
Sbjct: 398 ALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILAN 177
R+YFT+AT+IIAVPTGIKIF L+++ + + N ++ F+ F +GG +G+IL+N
Sbjct: 285 RSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILSN 344
Query: 178 SSIDITLHDTYYVVAHFHYVLSIGAV 255
+S+D LHDTYYVVAHFH V+++ V
Sbjct: 345 ASVDHYLHDTYYVVAHFHIVVALSLV 370
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 89.4 bits (212), Expect = 5e-17
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG+TGV+LA ++
Sbjct: 311 AIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAA 370
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
D HDTY+VVAHFHYV+ G V
Sbjct: 371 ADYQFHDTYFVVAHFHYVIIGGVV 394
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 413
+P G L+ + KI F FIG ++TFF QHF+GL G+PRR
Sbjct: 405 WPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 89.0 bits (211), Expect = 7e-17
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
ID+ LHDT YVV HFH+VLSIGA+
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAI 392
Score = 40.3 bits (90), Expect = 0.032
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 291 LFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
L G+ L++ + + I V +TF P HF G + +PRR DYPD
Sbjct: 406 LLFGIILSNRLSSLIAPIFMISVLLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 88.6 bits (210), Expect = 9e-17
Identities = 36/80 (45%), Positives = 57/80 (71%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GGL+G+ +A + +D
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVD 412
Query: 190 ITLHDTYYVVAHFHYVLSIG 249
I +HDTY++VAHFHYVL G
Sbjct: 413 IVIHDTYFIVAHFHYVLFAG 432
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 422
A+ G +P G +N KI F FI +N TFF H LG+ G PRR +D
Sbjct: 436 AVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++GV LA+
Sbjct: 320 AFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASPP 379
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
I++ D+YYVVAH HYVL GA+
Sbjct: 380 INVQQTDSYYVVAHMHYVLFGGAI 403
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
I G +P TG L+ + K QF+ + I N+TFFP H G AG+PRR Y
Sbjct: 406 IFAGIFYWFPKMTGRMLDERLGKWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A + D
Sbjct: 324 FSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSD 383
Query: 190 ITLHDTYYVVAHFHYVLSIGAV 255
HDTY+VVAHFHYVL G++
Sbjct: 384 AQQHDTYFVVAHFHYVLIGGSI 405
Score = 39.9 bits (89), Expect = 0.042
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
AI+ G + +P G L+ + + F IF G + FP H LGL G+PRR Y
Sbjct: 407 AILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 87.0 bits (206), Expect = 3e-16
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGLTGV++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVP 377
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
D +HDTY+VVAHFHYVL GAV
Sbjct: 378 FDTQVHDTYFVVAHFHYVLVGGAV 401
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
++G +P TG ++ + + F IF G N+TFFP H LGL G+PRR Y
Sbjct: 404 LLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 86.6 bits (205), Expect = 4e-16
Identities = 39/83 (46%), Positives = 61/83 (73%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+GV++A+
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPF 384
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
D+ HDTY+VVAHFHYVL GAV
Sbjct: 385 DMQAHDTYFVVAHFHYVLIGGAV 407
Score = 59.3 bits (137), Expect = 6e-08
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
++GG YP FTG ++ + K+ F+ F G N+TFFP H LGL G+PRR Y D
Sbjct: 410 LLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 86.2 bits (204), Expect = 5e-16
Identities = 41/86 (47%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILAN 177
+F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV++A
Sbjct: 329 FFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVAL 387
Query: 178 SSIDITLHDTYYVVAHFHYVLSIGAV 255
ID +HDTY+VVAHFHYVL G V
Sbjct: 388 VPIDFQVHDTYFVVAHFHYVLIGGMV 413
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +3
Query: 288 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
P F+ L+ + + F+ +FIG N+TFFP H GL G+PRR YPD
Sbjct: 425 PAFSRNMLSERLGRWVFWLMFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 86.2 bits (204), Expect = 5e-16
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RAYF +I+I +PT +K+F + + T + + + F+F+F +G +TG+ L+N
Sbjct: 304 RAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNV 363
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
IDI LHDTY+VV HFHYVLS+GAV
Sbjct: 364 GIDIMLHDTYFVVGHFHYVLSLGAV 388
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +3
Query: 258 AIIG---GFIN*YPLFTGLSLNSYILKIQFF--TIFIGVNITFFPQHFLGLAGIPRRYSD 422
A++G GFI + L L + Y+ + +F T+FIG N+ FFP H LG+ PRR SD
Sbjct: 387 AVVGFFTGFI--HFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISD 444
Query: 423 YP 428
YP
Sbjct: 445 YP 446
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 85.4 bits (202), Expect = 9e-16
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A I
Sbjct: 322 FFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPI 381
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
D L DTY+VVAHFHYVL G V
Sbjct: 382 DWQLTDTYFVVAHFHYVLIGGLV 404
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
+P TG LN I +QF+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 415 FPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 82.6 bits (195), Expect = 6e-15
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG+TG+IL N+++D
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMD 425
Query: 190 ITLHDTYYVVAHFHYVL 240
I LHDTYYVVAHFH V+
Sbjct: 426 IQLHDTYYVVAHFHLVM 442
Score = 46.8 bits (106), Expect = 4e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 416
++ G + +P G ++ + I F+ F+G + FFP H++G+AG PRRY
Sbjct: 450 MMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 82.6 bits (195), Expect = 6e-15
Identities = 36/83 (43%), Positives = 58/83 (69%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG+TGV+LA
Sbjct: 347 FFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGA 406
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
D LH++ +V+AHFH V+ GAV
Sbjct: 407 DFVLHNSLFVIAHFHNVIIGGAV 429
Score = 32.3 bits (70), Expect = 8.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 264 IGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 428
I GF +P G +LN K F+ G + F P + LG G+ RR +SD P
Sbjct: 433 IAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSDNP 489
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 82.2 bits (194), Expect = 8e-15
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG+TGV+LA
Sbjct: 347 AFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPG 406
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
D LH++ +++AHFH + GAV
Sbjct: 407 ADYVLHNSLFLIAHFHNTIIGGAV 430
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 82.2 bits (194), Expect = 8e-15
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG+TGV+LA ++
Sbjct: 342 SFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAA 401
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
D H+TY++V+HFHYVL G V
Sbjct: 402 ADYQYHNTYFLVSHFHYVLIAGTV 425
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
A GFI YP G LN I K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 427 ACFAGFIFWYPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +GGLTG+ L
Sbjct: 257 RVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGMV 316
Query: 181 SIDITLHDTYYVVAHFHYVLSI 246
+ID+ + D+ +VV HFHYVL +
Sbjct: 317 AIDLGVSDSLFVVGHFHYVLGM 338
Score = 52.4 bits (120), Expect = 7e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
I+G I+ +PL TG + K+ F+ IF G NI +F Q G+ G PRRY DYP
Sbjct: 344 ILGAVIHWFPLATGKYYPENLGKLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = +1
Query: 22 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 201
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLS 368
Query: 202 DTYYVVAHFHYVLSI 246
+TYYVV HFHYV+++
Sbjct: 369 ETYYVVGHFHYVMAV 383
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
AI GG +P TG N I K F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 388 AIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TGV+L+ + +D
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLD 373
Query: 190 ITLHDTYYVVAHFHYVLSIGA 252
HD+Y+VVAHFH VL G+
Sbjct: 374 YQFHDSYFVVAHFHNVLMAGS 394
Score = 41.9 bits (94), Expect = 0.011
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
+P TG + + ++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 406 WPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.4 bits (187), Expect = 6e-14
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F +T++IA+P+ IK F ATI G ++ +N L + F+ +F VGGL+G+ +A +D
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVD 415
Query: 190 ITLHDTYYVVAHFHYVL 240
+ HDTY++VAHFHY+L
Sbjct: 416 VYFHDTYFIVAHFHYIL 432
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 422
+P G +N + K F FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 448 FPKMFGRMMNEKLGKTHFVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 79.4 bits (187), Expect = 6e-14
Identities = 33/81 (40%), Positives = 54/81 (66%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R AT+ +A+P+G+K+F +AT++G +I +L L F+ F VGG+TGV
Sbjct: 311 RVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVI 370
Query: 181 SIDITLHDTYYVVAHFHYVLS 243
++D+ LHDTY+V+ HFHY+++
Sbjct: 371 TLDLHLHDTYFVLGHFHYIVN 391
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG+TGV LA+
Sbjct: 386 RASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASI 445
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+D+ LH TYYVV HFHY++ +GA+
Sbjct: 446 PVDLVLHATYYVVGHFHYIV-MGAI 469
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
+PL+TG + K+ F+ IG NITFF LG G+PRRY+ Y
Sbjct: 481 FPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/78 (41%), Positives = 57/78 (73%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL VGGLTG++LA +I
Sbjct: 366 FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAI 425
Query: 187 DITLHDTYYVVAHFHYVL 240
+ T+H++ +VVAHFH ++
Sbjct: 426 NYTVHNSVFVVAHFHCMM 443
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F + T+IIA+PT IK++ + T+ I+ +L LGF+ F GGLTG+ L N +
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVV 402
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
D+ L DT +VVAHFH V+ + +
Sbjct: 403 DVPLSDTMFVVAHFHMVMGVAPI 425
Score = 58.8 bits (136), Expect = 9e-08
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
++G + YP TG LN + K F+ F+G + FFP H+LGL G+PRRY + D
Sbjct: 428 VLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 77.0 bits (181), Expect = 3e-13
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 177
R+YF+ AT II++PT +K+F + T G N + F+ F GG TG++L++
Sbjct: 311 RSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLLLSS 370
Query: 178 SSIDITLHDTYYVVAHFHYVLSIGA 252
S+DI LHDTY+VV HFH VLS+ A
Sbjct: 371 GSLDIMLHDTYFVVGHFHTVLSLAA 395
Score = 35.1 bits (77), Expect = 1.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 339 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 425 FLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 75.8 bits (178), Expect = 7e-13
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +GG+TGV LA
Sbjct: 355 RSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVI 414
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
ID+ LHDTYYVV HFH+++ GA+
Sbjct: 415 PIDLILHDTYYVVGHFHFIV-YGAI 438
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
+P+ TG + F+T +G N TF +LG G+PRRY+ Y
Sbjct: 450 FPMVTGRMYQKRLAHAHFWTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/84 (38%), Positives = 58/84 (69%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN
Sbjct: 366 AVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPI 425
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
+D +H+T ++VAHFH ++ G +
Sbjct: 426 LDYQVHNTVFLVAHFHNMVVPGVL 449
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/82 (42%), Positives = 56/82 (68%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG+TGV++A +
Sbjct: 346 FSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFN 405
Query: 190 ITLHDTYYVVAHFHYVLSIGAV 255
+ HD+Y+VVAH HYVL G V
Sbjct: 406 LQAHDSYFVVAHLHYVLIGGMV 427
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 288 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
P FTG ++ + K F+ +F G N+ FF H G+ G+PRR + YP
Sbjct: 439 PHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F+ T+II +P + L +++G+++ N L LGF+ +F GG++G LA SID
Sbjct: 352 FSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSID 411
Query: 190 ITLHDTYYVVAHFHYVLSIGAV 255
I LH TY+VV HFH V+ + A+
Sbjct: 412 IYLHATYFVVGHFHLVMGVAAI 433
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 258 AIIGGFIN*Y---PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
AI G F Y P TG +N + KI F+ FIG F P H+LG+ G RRYS +
Sbjct: 432 AIFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAYCIFMPFHYLGMVGNVRRYSSFV 491
Query: 429 D 431
D
Sbjct: 492 D 492
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATV 386
Query: 181 SIDITLHDTYYVVAHFHYVL 240
IDI + +TY+VVAHFHYV+
Sbjct: 387 PIDIHVGNTYFVVAHFHYVI 406
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
+ G + +P FTG + K+ F FIG + + P H+ GL G+PRR + Y
Sbjct: 414 VFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/83 (51%), Positives = 47/83 (56%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
DI LHDTYYVVAH HYVLS+GAV
Sbjct: 282 DIILHDTYYVVAHXHYVLSMGAV 304
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 326 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 448
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGLTG++LA+ +
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPL 385
Query: 187 DITLHDTYYVVAHFHYVL 240
D L D+Y+++AHFHY L
Sbjct: 386 DFHLADSYFLIAHFHYTL 403
Score = 49.6 bits (113), Expect = 5e-05
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
+P TG ++ + KI F+ F+G + TF QH++G G+PRRY+DY D
Sbjct: 419 FPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 72.5 bits (170), Expect = 6e-12
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG+TGV L D
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMIPFD 381
Query: 190 ITLHDTYYVVAHFHYVLSIG 249
+ +YYVVAHFH V+ G
Sbjct: 382 YQVTMSYYVVAHFHNVMMFG 401
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 285 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
+P TG L+ + F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 414 WPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 71.3 bits (167), Expect = 1e-11
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 13 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 192
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 193 TLHDTYYVVAHFHYVL 240
L+ TY+VV HFHY++
Sbjct: 364 ALNGTYFVVGHFHYMV 379
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F T+I+ V T IK+F + T++ + + GF+F GG+TG+ L S+D
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLD 389
Query: 190 ITLHDTYYVVAHFHYVLSIGA 252
+ HDTY+VVAHFH+++ +GA
Sbjct: 390 VAWHDTYFVVAHFHFIM-VGA 409
Score = 40.3 bits (90), Expect = 0.032
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 345 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
I +G N TF PQ LG G+PRRY +YP+
Sbjct: 442 IILGFNATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 190 ITLHDTYYVVAHFHYVLSIGAV 255
+ LHDT +VV HFH+ ++ +V
Sbjct: 402 LYLHDTMFVVGHFHFTMAAASV 423
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
A+F++A+ ++AVPT +++F + T+ + +L L F F +GGLTGV++A
Sbjct: 318 AFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVP 377
Query: 184 IDITLHDTYYVVAHFHYVLSIGAV 255
D +HDTY++VAH HYVL G V
Sbjct: 378 FDWQVHDTYFIVAHLHYVLIGGFV 401
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 69.7 bits (163), Expect = 5e-11
Identities = 33/79 (41%), Positives = 52/79 (65%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 183
A+F +A+++I++P+ + +F +ATI + + L GFV +F VGG++GV+ A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVP 397
Query: 184 IDITLHDTYYVVAHFHYVL 240
+D L DTY+VVAH HYVL
Sbjct: 398 LDWQLTDTYFVVAHLHYVL 416
Score = 56.8 bits (131), Expect = 3e-07
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
++GG +P FTG +N K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 424 VLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 6e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 327 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 69.3 bits (162), Expect = 6e-11
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F++A+ + +PTGI++F +AT+ ++ +L G + +FT GGLTGV++A +
Sbjct: 345 FFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVAIAPF 404
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
D +HDTY++VAH HY L G V
Sbjct: 405 DWQVHDTYFIVAHLHYTLFGGMV 427
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
II G YP+ T +L+ + + F+ +F G N+TF P H GL G+PRR YP
Sbjct: 430 IIAGVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 68.9 bits (161), Expect = 8e-11
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLFTVGGLTGVIL 171
++F +A+ +A+P+G+++F +AT + I L LGF+F+F +GGLTGV++
Sbjct: 387 SFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVMV 446
Query: 172 ANSSIDITLHDTYYVVAHFHYVLSIGAV 255
A D HD+Y++VAH HYVL G V
Sbjct: 447 AVIPFDWQAHDSYFIVAHLHYVLVGGMV 474
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 336 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 502 FGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 186
+F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG +GVIL+ ++
Sbjct: 342 FFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNL 401
Query: 187 DITLHDTYYVVAHFHYVLSIGAV 255
D H++ +++AHFH V+ IG V
Sbjct: 402 DFIFHNSMFLIAHFHSVI-IGGV 423
Score = 34.7 bits (76), Expect = 1.6
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYIL--KIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDY 425
++ G+++ L+ L N+ L K F +F IGV +TFFP +FLG G+ RR + Y
Sbjct: 423 VLFGYLSGISLWYNLIYNNCELNNKFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F ++ + + T IK+F AT++ I + GF+F GG+TG+ LA S+D
Sbjct: 323 FGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLD 382
Query: 190 ITLHDTYYVVAHFHYVLSIGA 252
+ HDTY++VAHFH+++ +GA
Sbjct: 383 VHWHDTYFIVAHFHFIM-VGA 402
Score = 40.3 bits (90), Expect = 0.032
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 345 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
I +G N TF PQ LG G+PRRY YP+
Sbjct: 435 IILGFNFTFIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 66.5 bits (155), Expect = 4e-10
Identities = 30/85 (35%), Positives = 54/85 (63%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R +++ TI+I++P IK+ ++ + + L + F+ LF V G TG+ L++
Sbjct: 462 RTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTGMWLSHV 521
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
S+++++HDT+YVVAHFH +LS A+
Sbjct: 522 SLNVSMHDTFYVVAHFHIMLSGAAI 546
Score = 34.3 bits (75), Expect = 2.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 363 ITFFPQHFLGLAGIPRRYSDYP 428
+ F PQ +LG +G+PRR DYP
Sbjct: 583 VAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 66.1 bits (154), Expect = 6e-10
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
A F++A+ ++AVPT +++F + T+ GT P ++ L F F +GGLTGV++A
Sbjct: 318 ALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVV 376
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
D +HDT+++VAH HYVL G V
Sbjct: 377 PFDWQVHDTHFIVAHLHYVLVGGFV 401
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
+ F + TI I++P + +F + T+ ++ + L LG + LF +GG+TGV L
Sbjct: 323 KTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFLGAI 382
Query: 181 SIDITLHDTYYVVAHFHYVLSIGA 252
+D TY+VVAHFHYV+ GA
Sbjct: 383 VLDYQFRGTYWVVAHFHYVMVAGA 406
Score = 41.5 bits (93), Expect = 0.014
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +3
Query: 258 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 431
A+ GG YP TG N + KIQF F+G N+ +FP F+ PRR YP+
Sbjct: 408 ALFGGLYYWYPKITGKMYNETLGKIQFGVYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/65 (52%), Positives = 39/65 (60%)
Frame = +2
Query: 254 FCNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRL 433
FCNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S L
Sbjct: 90 FCNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSL 149
Query: 434 IYFMK 448
I +K
Sbjct: 150 IQLLK 154
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LAT 75
RAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 5 RAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 62.1 bits (144), Expect = 9e-09
Identities = 30/85 (35%), Positives = 52/85 (61%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
R +++ TI+I++P + + + T++ ++ Y +L +G + F +GG TGV L +
Sbjct: 309 RLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGSI 368
Query: 181 SIDITLHDTYYVVAHFHYVLSIGAV 255
+ID TY+VVAHFHY+L +G V
Sbjct: 369 AIDRGFRGTYWVVAHFHYIL-VGTV 392
Score = 37.1 bits (82), Expect = 0.30
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
+I G +P TG + + + KI F +GV +TF PQ L +PRRY Y
Sbjct: 396 LIAGLYYWWPKITGRTYSERLGKIHFALAMLGVALTFLPQ--FALMDMPRRYFTY 448
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +1
Query: 10 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 189
F + T +++PTG + TI G ++ N +L L + F +GGLTG+ A+ D
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPAD 455
Query: 190 ITLHDTYYVVAHFH 231
+ LH+TY+V+AHFH
Sbjct: 456 LQLHNTYWVIAHFH 469
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 55.6 bits (128), Expect = 8e-07
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = +2
Query: 257 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 436
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +F SRLI
Sbjct: 91 CNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPLFWFSRLI 150
Query: 437 YFMK 448
+K
Sbjct: 151 LLLK 154
Score = 34.3 bits (75), Expect = 2.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 57 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 179
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 55.6 bits (128), Expect = 8e-07
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +1
Query: 22 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 201
T I++PT + I +AT+ G + + IL L F +GG++GV ++ +ID +H
Sbjct: 337 TETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVH 396
Query: 202 DTYYVVAHFHYVL 240
YYVVAHFHY +
Sbjct: 397 GDYYVVAHFHYFM 409
Score = 33.1 bits (72), Expect = 4.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 261 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 425
++G +P FTG + + +I + + GVNI +FP F L +PRR Y
Sbjct: 417 LMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPMFF--LYDLPRRVYTY 469
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +3
Query: 264 IGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 428
IG F +P TG N + KI F F+G + FF QH LG+ G+PRR DYP
Sbjct: 391 IGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 180
+ F T+ + + +F +AT+ +I ++ ++ +G + LF G GV+ A
Sbjct: 303 KTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAM 362
Query: 181 SIDITLHDTYYVVAHFH 231
+D T HDTY+VV HFH
Sbjct: 363 PLDFTTHDTYWVVGHFH 379
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVGGLTGV 165
RA+ T +T+++A +G+ + TI T Y+ LG FL F +GG+ +
Sbjct: 66 RAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIGGVQAL 122
Query: 166 ILANSSIDITLHDTYYVVAHFHYVL 240
L + I+ +H+TYYVV HFHY++
Sbjct: 123 PLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFTVGGLTG 162
+F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT+GG G
Sbjct: 44 FFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMGGRQG 96
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 108
RAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 302 RAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +3
Query: 285 YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 431
+P TG +L +++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 387 WPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
Score = 37.1 bits (82), Expect = 0.30
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAV 255
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + + GA+
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFA-GAI 375
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.014
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 136 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 231
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 40.7 bits (91), Expect = 0.024
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIF 60
RAYFT+AT+IIAVPTGIKIF
Sbjct: 11 RAYFTAATMIIAVPTGIKIF 30
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 40.3 bits (90), Expect = 0.032
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +1
Query: 19 ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITL 198
+T+ I++ + + +F LA + + I P + L +F + G +GV A + ++ L
Sbjct: 332 STMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYL 391
Query: 199 HDTYYVVAHFH 231
H+T +VVAHFH
Sbjct: 392 HNTLWVVAHFH 402
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 39.9 bits (89), Expect = 0.042
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +1
Query: 4 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 159
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 160 GVILANSSIDITLHDTYYVVAHFHYVLSIG 249
GV++ +++T H+T+ V HFH +++G
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFHGTVALG 405
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 39.5 bits (88), Expect = 0.056
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +1
Query: 322 Y*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH 462
Y KFNFL Y E I F NIF LEYLDDI IIQ EI F H
Sbjct: 406 YSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHH 452
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 53 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 154
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.056
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 130 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 231
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 38.3 bits (85), Expect = 0.13
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 121 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIG 249
L + +GG++GV + I+I +H+T YV HFH ++ G
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFHATVAAG 393
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 38.3 bits (85), Expect = 0.13
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 130 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIG 249
+ LF + G +GV+ A+ +++ +H+T +VV HFH + G
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGG 379
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 37.9 bits (84), Expect = 0.17
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 1 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVIL 171
R + +T+I+A +G+ + TI T Y+ P + L + F + G ++L
Sbjct: 296 REWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIGFILAGAQALVL 354
Query: 172 ANSSIDITLHDTYYVVAHFHYVL 240
+SI+ H++YYVV HFH ++
Sbjct: 355 PENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 37.5 bits (83), Expect = 0.23
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 22 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 201
T + +P+ + F AT G + +N + G+TG+ A S D +H
Sbjct: 316 TYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAGVTGISNATISFDAIVH 375
Query: 202 DTYYVVAHFHYVLSIGAV 255
+T +VV HFH ++ V
Sbjct: 376 NTDWVVGHFHAMILFSIV 393
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.52
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 163 VILANSSIDITLHDTYYVVAHFHYV 237
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 35.5 bits (78), Expect = 0.91
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 130 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGA 252
+ F GG+ G+I A+ ++ +H+T +VV HFH +++GA
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH--ITVGA 391
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 0.91
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +1
Query: 100 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 243
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFA 374
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 0.91
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 100 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 231
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q5KZD0 Cluster: Cytochrome c oxidase (B(O/a)3-type) chain
I; n=2; Geobacillus|Rep: Cytochrome c oxidase
(B(O/a)3-type) chain I - Geobacillus kaustophilus
Length = 387
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 127 FVFLFTVGGLTGVI--LANSSIDIT--LHDTYYVVAHFHYVLSIGAV 255
F+FL G + GV+ +A+++I I +H+T +V HFH + IGAV
Sbjct: 238 FIFLSMFGWVAGVMPAIADATIVINHVMHNTKWVPGHFHMYMGIGAV 284
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +1
Query: 130 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIG 249
+ LF GG G+I A+ +I++ +H+T ++ HFH L++G
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH--LTVG 396
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 35.1 bits (77), Expect = 1.2
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 7 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 114
+F+S T+II VPTGIK+F L + +++N IL
Sbjct: 67 FFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 136 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIG 249
+F GG +G++ A +I+ +H+T +V HFH L++G
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH--LTVG 393
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 269 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIY 439
G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++ I+
Sbjct: 18 GLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKNIF 72
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.5 bits (73), Expect = 3.7
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 136 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIG 249
+F +G++ A +I+ +H+T++VV HFH L++G
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH--LTVG 385
>UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Schizaphis graminum|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Schizaphis graminum (Aphid)
Length = 556
Score = 33.1 bits (72), Expect = 4.9
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 254 FCNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRL 433
FC ++ L+S PF Y+K+ IF N F FF FS+ T F R+
Sbjct: 321 FCGLIFMFTLMSLCGFPFFCSFYSKDLIFEYFLMMNLNFFFFFFFLFSF-LLTFFYSIRV 379
Query: 434 IYFM 445
IY++
Sbjct: 380 IYYL 383
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 6.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 139 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 231
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
>UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY06083;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06083 - Plasmodium yoelii yoelii
Length = 1402
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = -3
Query: 480 EKYMNLMKKLYFMKYMSL---DNLNIVEVFQLNLKNVVEK 370
E+++NLM + YF+KY+++ +N+ I F L +K +EK
Sbjct: 249 ERHINLMDQSYFIKYINILLYNNIKIENSFFLFIKKYIEK 288
>UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA -
Sulfolobus metallicus
Length = 595
Score = 32.3 bits (70), Expect = 8.5
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +1
Query: 121 LGFVFLFTVGGLTGVILANS-----SIDITLHDTYYVVAHFHYVLSIGAV 255
L F+F V + G I A S+D T+H+T ++ +HFH +L++ +V
Sbjct: 357 LAFIFAAAVWNIIGGIQAEPTQPTPSVDPTVHNTLWLPSHFHIMLALYSV 406
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,794,106
Number of Sequences: 1657284
Number of extensions: 6238784
Number of successful extensions: 14626
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 14138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14603
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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