Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0551
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5TRI0 Cluster: Possible sensor histidine kinase; n=1; ...    33   4.3  
UniRef50_Q9U0K9 Cluster: Putative uncharacterized protein PFD038...    33   5.7  
UniRef50_Q4D432 Cluster: Putative uncharacterized protein; n=2; ...    33   5.7  
UniRef50_A7AXE7 Cluster: ClpC; n=1; Babesia bovis|Rep: ClpC - Ba...    33   5.7  
UniRef50_Q4Z0X0 Cluster: Asparagine--tRNA ligase, putative; n=2;...    32   9.9  
UniRef50_Q23YC9 Cluster: Putative uncharacterized protein; n=3; ...    32   9.9  
UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    32   9.9  

>UniRef50_A5TRI0 Cluster: Possible sensor histidine kinase; n=1;
           Fusobacterium nucleatum subsp. polymorphum ATCC
           10953|Rep: Possible sensor histidine kinase -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 265

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = -3

Query: 529 IKKRKVLKYLTIRHL--FIYKINLKTSFYFYYIFYNSGVNFNIFFR 398
           ++K K+L Y  I ++  F+YKI+ K S + YY   N G++ N F++
Sbjct: 141 LRKVKILPYERIEYIANFLYKISSKMSNFIYY--QNMGISANEFYK 184


>UniRef50_Q9U0K9 Cluster: Putative uncharacterized protein PFD0380c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFD0380c - Plasmodium falciparum (isolate 3D7)
          Length = 1629

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -3

Query: 535  LNIKKRKVLKYLTIRHLFIYKINLKTSFYFYYIFYNSGVNFNIFFRY 395
            LNIK +K LK          KIN K  +YFY +F+   +++N F +Y
Sbjct: 1362 LNIKSKKKLK--------TNKINKKKKYYFYKLFHKFRMSYNHFIKY 1400


>UniRef50_Q4D432 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1448

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -3

Query: 466 LKTSFYFYYIFYNSGVNFNIFFRYP 392
           L +SFYFYY +Y  GV F IFF +P
Sbjct: 60  LSSSFYFYYYYYFYGVLF-IFFLFP 83


>UniRef50_A7AXE7 Cluster: ClpC; n=1; Babesia bovis|Rep: ClpC -
           Babesia bovis
          Length = 541

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 25/69 (36%), Positives = 32/69 (46%)
 Frame = -3

Query: 595 IFKELSVFLYPIG*KYIRNILNIKKRKVLKYLTIRHLFIYKINLKTSFYFYYIFYNSGVN 416
           I K +  F  P     + N+L      +   L+I    IYKINL  SFYFY I  N   +
Sbjct: 418 ILKSIKDFFRPEFLGRVNNMLIFDPVSLPMCLSILDNIIYKINLNNSFYFYDIDENLKNS 477

Query: 415 FNIFFRYPI 389
           F I + Y I
Sbjct: 478 F-IKYSYNI 485


>UniRef50_Q4Z0X0 Cluster: Asparagine--tRNA ligase, putative; n=2;
           Plasmodium (Vinckeia)|Rep: Asparagine--tRNA ligase,
           putative - Plasmodium berghei
          Length = 886

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
 Frame = -3

Query: 553 KYIRNILNIKKRKVLKYLTIRHLFIYK---INLKTSFYFYYIFYNSGVNFNIFFRYPIHL 383
           K I   +++K++K +K L  + L+IY+    N + ++ + +I YN   +  +  +YP+H+
Sbjct: 698 KNINIKISVKEKKEIKKL--KKLYIYQKDFTNDELNYLYLFIKYNFNTDIFVIDQYPLHI 755

Query: 382 R 380
           R
Sbjct: 756 R 756


>UniRef50_Q23YC9 Cluster: Putative uncharacterized protein; n=3;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1538

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = -3

Query: 583 LSVFLYPIG*KYIRNIL---NIKKRKVLKYLTIRHLFIYKINLKTSFYFYYIFYNSGVN 416
           L+VF + +   YI NI+    I+K K+ KYL    LF   I  K SF   Y+F N  +N
Sbjct: 46  LTVFSFVLNISYILNIIFDKAIRKFKIKKYLETYFLFYTTIYNKWSF---YVFLNISLN 101


>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = -3

Query: 514 VLKYLTIRHLFIYKINLKTSFYF-YYIFYNSGVNFNIF---FRYPI 389
           ++ +L   +LFIY INL+  + F YY  +N  +  NIF   +RY I
Sbjct: 331 LILFLIYFYLFIYFINLQNIYLFIYYFIFNDFIIINIFLYLYRYYI 376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,633,508
Number of Sequences: 1657284
Number of extensions: 9180648
Number of successful extensions: 17272
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17246
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)