Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0550
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.40 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +2

Query: 317 LCMCRPMELCIMVTNAFQK---LIYQFTWYCQ 403
           +C+   + LC  V    QK   L Y+  WYCQ
Sbjct: 265 VCLLSLIILCDCVVKEAQKSLVLTYEMRWYCQ 296


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 573 IQCDIYNSLDIFETIFG*YFH*VFKFCTI 487
           + C++ N++D F  IFG  F  +  + T+
Sbjct: 185 LACELKNTVDDFNDIFGISFLLIISYSTL 213


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -1

Query: 141 FISKLVIISS*PSVLFTVISRV--IHILSSVVKFPILFLTIVFQLMLVP 1
           F S +++I+    + +   S+V   H L++     + FLTI+F   ++P
Sbjct: 201 FTSPMLVIAEYKQLDYFDGSKVPACHTLANTFWSALYFLTIIFLFFIIP 249


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 466 NMKLCLFYGAEFEHSMKISPENGFKNIQRVIYVT 567
           +M   +F   E  H   +  E+GF+N  +   V+
Sbjct: 11  SMAFIIFVSLEIYHIYTVVEESGFENFVKTYLVS 44


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = -3

Query: 148 CFLYIKIGD--YIVITFSFIYCYLTCYTYFVFCSKIPHFIFD 29
           C LY+   D  Y        + + T   YF FCS  PH ++D
Sbjct: 317 CELYMAFMDRLYFSNLDKDAFIHRTVDDYF-FCSPHPHKVYD 357


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 292 SCCIDSVAAMHVQANGIVHY 351
           S  IDSVA     ++GI HY
Sbjct: 481 SRAIDSVACSKTVSDGIRHY 500


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +1

Query: 295 CCIDSVAAMHVQANGIVHYGHKCFSKTDIPVY 390
           C I  +   HV+++  + +  +C +    P Y
Sbjct: 182 CSIPQMVVFHVESHPNITWYQQCVTYNVFPTY 213


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +1

Query: 295 CCIDSVAAMHVQANGIVHYGHKCFSKTDIPVY 390
           C I  +   HV+++  + +  +C +    P Y
Sbjct: 182 CSIPQMVVFHVESHPNITWYQQCVTYNVFPTY 213


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 112 ITFSFIYCY 86
           I FSF YCY
Sbjct: 268 IVFSFCYCY 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,311
Number of Sequences: 336
Number of extensions: 4053
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)