Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0550
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          29   0.17 
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    24   3.6  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.2  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 466  CHQNHIFLSMYLLLHQNPVFLLAIPCKLV 380
            C    +F S+  L++Q+ +  LA+PC+L+
Sbjct: 1294 CANEPVFTSLSALVYQHSITPLALPCRLI 1322


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 581 IF*FNVTYITLWIFLK 534
           +F +N+ Y  LW+FLK
Sbjct: 11  LFMYNIYYRALWLFLK 26


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 355 HKCFSKTDIPVY 390
           H CF++ D+P+Y
Sbjct: 863 HTCFNRLDLPMY 874


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,965
Number of Sequences: 2352
Number of extensions: 15992
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)