Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0550
(642 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069384-1|AAL39529.1| 469|Drosophila melanogaster LD09414p pro... 66 3e-11
AE014297-1917|AAF55111.1| 469|Drosophila melanogaster CG7265-PA... 66 3e-11
AY069411-1|AAL39556.1| 454|Drosophila melanogaster LD10878p pro... 48 1e-05
AE014296-2006|AAN11880.1| 454|Drosophila melanogaster CG11652-P... 48 1e-05
AE014296-2005|AAF50025.1| 454|Drosophila melanogaster CG11652-P... 48 1e-05
AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5 p... 29 7.1
AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB... 29 7.1
AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA... 29 7.1
>AY069384-1|AAL39529.1| 469|Drosophila melanogaster LD09414p
protein.
Length = 469
Score = 66.5 bits (155), Expect = 3e-11
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VDLYIMGDTSYASCCIDSVAAMHVQANGIVHYGHKCFSK-TDIPVYMVLPKEKLDFDAAI 432
V ++I+ DT+Y SCC+D +AA HV A+ ++H+G+ C S+ +PV + P+ LD + +
Sbjct: 83 VKVFILADTTYGSCCVDEIAAAHVDADSVIHFGNACRSRAARLPVLYLYPELPLDVNVLL 142
Query: 433 NTLKEKYDSDDNMKLCLFYGAEFEH 507
+ L+ + ++C++ ++H
Sbjct: 143 SKLQGLRAESIDRQVCVYLDIGYQH 167
Score = 38.3 bits (85), Expect = 0.009
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 50 FTTEDKICITREITVNKTEGYDDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKV 229
F++ D + R+ V + + I + + WI + + +VCLQFPDD L S +
Sbjct: 11 FSSSDTAALERQAEVEQPVTLEQIWNENHRRSSVDWIRKSGYKRVCLQFPDDYLPHSNAI 70
Query: 230 YKEIKD 247
+K+
Sbjct: 71 SVGLKE 76
>AE014297-1917|AAF55111.1| 469|Drosophila melanogaster CG7265-PA
protein.
Length = 469
Score = 66.5 bits (155), Expect = 3e-11
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VDLYIMGDTSYASCCIDSVAAMHVQANGIVHYGHKCFSK-TDIPVYMVLPKEKLDFDAAI 432
V ++I+ DT+Y SCC+D +AA HV A+ ++H+G+ C S+ +PV + P+ LD + +
Sbjct: 83 VKVFILADTTYGSCCVDEIAAAHVDADSVIHFGNACRSRAARLPVLYLYPELPLDVNVLL 142
Query: 433 NTLKEKYDSDDNMKLCLFYGAEFEH 507
+ L+ + ++C++ ++H
Sbjct: 143 SKLQGLRAESIDRQVCVYLDIGYQH 167
Score = 38.3 bits (85), Expect = 0.009
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 50 FTTEDKICITREITVNKTEGYDDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKV 229
F++ D + R+ V + + I + + WI + + +VCLQFPDD L S +
Sbjct: 11 FSSSDTAALERQAEVEQPVTLEQIWNENHRRSSVDWIRKSGYKRVCLQFPDDYLPHSNAI 70
Query: 230 YKEIKD 247
+K+
Sbjct: 71 SVGLKE 76
>AY069411-1|AAL39556.1| 454|Drosophila melanogaster LD10878p
protein.
Length = 454
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 259 DLYIMGDTSYASCCIDSVAAMHVQANGIVHYGHKCFSKTD 378
D IMGD +Y +CC+D A + A+ +VHYGH C D
Sbjct: 105 DTVIMGDVTYGACCVDDYTAKALGADLLVHYGHSCLIPVD 144
>AE014296-2006|AAN11880.1| 454|Drosophila melanogaster CG11652-PB,
isoform B protein.
Length = 454
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 259 DLYIMGDTSYASCCIDSVAAMHVQANGIVHYGHKCFSKTD 378
D IMGD +Y +CC+D A + A+ +VHYGH C D
Sbjct: 105 DTVIMGDVTYGACCVDDYTAKALGADLLVHYGHSCLIPVD 144
>AE014296-2005|AAF50025.1| 454|Drosophila melanogaster CG11652-PA,
isoform A protein.
Length = 454
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 259 DLYIMGDTSYASCCIDSVAAMHVQANGIVHYGHKCFSKTD 378
D IMGD +Y +CC+D A + A+ +VHYGH C D
Sbjct: 105 DTVIMGDVTYGACCVDDYTAKALGADLLVHYGHSCLIPVD 144
>AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5
protein.
Length = 1854
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 576 EDKPERFLGRIIKDVQNV 629
EDKPE GR++ +QNV
Sbjct: 69 EDKPESLFGRVVNKIQNV 86
>AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB,
isoform B protein.
Length = 1809
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 576 EDKPERFLGRIIKDVQNV 629
EDKPE GR++ +QNV
Sbjct: 29 EDKPESLFGRVVNKIQNV 46
>AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA,
isoform A protein.
Length = 1809
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 576 EDKPERFLGRIIKDVQNV 629
EDKPE GR++ +QNV
Sbjct: 29 EDKPESLFGRVVNKIQNV 46
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,131,617
Number of Sequences: 53049
Number of extensions: 624431
Number of successful extensions: 1624
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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