Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0548
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.4  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 141 YVLNLFLFFSYEK*KFC*FCFVNTNRTSIVCL 236
           Y+ +LF FF +EK KF  F   N +  S++ L
Sbjct: 218 YIDDLF-FFRFEKSKFEPFLISNISLVSLIFL 248


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 559 LFFMFYCFVVINSN 518
           LF++FYC+  I  +
Sbjct: 16  LFYLFYCYKTIKQH 29


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 559 LFFMFYCFVVINSN 518
           LF++FYC+  I  +
Sbjct: 16  LFYLFYCYKTIKQH 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,073
Number of Sequences: 336
Number of extensions: 2230
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)