Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0547
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 29 3.6
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 29 3.6
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 28 6.3
AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical... 28 6.3
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 269 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 317
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 38 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 86
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 36 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 84
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 94 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 142
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 269 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 317
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 38 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 86
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 36 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 84
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 150 FEPLSTVNTSCNMKIL--VQTVKNLNTN-FYSSKLSLQPGGSTSLRAAATS 7
FEP TV + + L VQ V++ N + F +S LSL P G S+RAA S
Sbjct: 94 FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLNPNG--SIRAACDS 142
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 162 LNIDFEPLSTVNTSCNMKILVQTVKNLNTNFY 67
+NIDF+P T+ + N L + K +N ++Y
Sbjct: 106 VNIDFQPTGTIRLATNETRLAEFRKYVNRDYY 137
>AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical
protein Y37E3.17b protein.
Length = 837
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 162 LNIDFEPLSTVNTSCNMKILVQTVKNLNTNFY 67
+NIDF+P T+ + N L + K +N ++Y
Sbjct: 113 VNIDFQPTGTIRLATNETRLAEFRKYVNRDYY 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,281,650
Number of Sequences: 27780
Number of extensions: 228201
Number of successful extensions: 430
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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