Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0545
(576 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 121 1e-26
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 120 2e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 119 6e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 118 7e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 118 1e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 118 1e-25
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 117 2e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 114 1e-24
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 107 1e-22
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 107 2e-22
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 107 2e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 107 2e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 105 6e-22
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 105 7e-22
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 103 3e-21
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 102 7e-21
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 98 1e-19
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 97 3e-19
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 94 2e-18
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 91 1e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 91 1e-17
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 90 4e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 89 9e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 87 3e-16
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 86 6e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 84 3e-15
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 83 5e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 83 6e-15
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 81 2e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 78 2e-13
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 77 4e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 76 7e-13
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 75 1e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 75 2e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 3e-12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 73 4e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 73 4e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 72 1e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 72 1e-11
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 71 1e-11
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 71 2e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 71 3e-11
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 70 3e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 6e-11
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 69 8e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 1e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 2e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 67 2e-10
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 67 3e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 66 6e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 66 6e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 66 7e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 65 1e-09
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 65 1e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 65 1e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 64 2e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 64 2e-09
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 64 2e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 64 2e-09
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 64 3e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 63 4e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 63 5e-09
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 63 5e-09
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 62 9e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 62 9e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 1e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 61 2e-08
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 61 2e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 3e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 60 4e-08
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 60 4e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 60 5e-08
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 60 5e-08
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 59 6e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 8e-08
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 59 8e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 58 1e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 58 1e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 58 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 58 2e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 56 8e-07
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 54 2e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 53 4e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 51 2e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 51 2e-05
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 49 7e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 46 5e-04
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 46 5e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 8e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 46 8e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 45 0.001
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 41 0.018
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 41 0.018
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 40 0.042
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 38 0.17
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.30
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.30
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 0.90
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 36 0.90
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 35 1.2
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.6
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.6
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 34 2.8
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 2.8
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 4.8
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 33 6.4
UniRef50_Q4Z6G4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 121 bits (291), Expect = 1e-26
Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKK+
Sbjct: 191 TMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKE 250
Query: 435 LLVV*DNL-CYTSIGVLGFIV 494
+ + +IG LGFIV
Sbjct: 251 TFGMLGMIYAMLTIGFLGFIV 271
Score = 56.8 bits (131), Expect = 3e-07
Identities = 35/82 (42%), Positives = 40/82 (48%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLS + H G SVDL IFSLHLAG SS + D++ LF
Sbjct: 109 GWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLF 168
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
+V ITA AGAI
Sbjct: 169 SWSVFITAILLLLSLPVLAGAI 190
Score = 43.6 bits (98), Expect = 0.003
Identities = 17/22 (77%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
T+G+D+DTRAYFTSAT+IIA+P
Sbjct: 278 TIGMDVDTRAYFTSATMIIAIP 299
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 120 bits (289), Expect = 2e-26
Identities = 58/80 (72%), Positives = 63/80 (78%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S GK
Sbjct: 210 TMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGKPV 269
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIGVLGF+V
Sbjct: 270 FGYLGMVYAMISIGVLGFLV 289
Score = 62.9 bits (146), Expect = 5e-09
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLF
Sbjct: 128 GWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLF 187
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V +V +TAF AGAI
Sbjct: 188 VWSVLVTAFLLLLSLPVLAGAI 209
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFT+AT+IIAVP
Sbjct: 296 TVGLDVDTRAYFTAATMIIAVP 317
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 119 bits (286), Expect = 6e-26
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKK+
Sbjct: 207 TMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKE 266
Query: 435 LLVV*DNL-CYTSIGVLGFIV 494
+ +IG+LGFIV
Sbjct: 267 PFGYMGMVWAMMAIGLLGFIV 287
Score = 62.9 bits (146), Expect = 5e-09
Identities = 35/68 (51%), Positives = 39/68 (57%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLF
Sbjct: 125 GWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLF 184
Query: 190 V*AVGITA 213
V AV +TA
Sbjct: 185 VWAVLVTA 192
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFTSAT+IIA+P
Sbjct: 294 TVGMDVDTRAYFTSATMIIAIP 315
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 118 bits (285), Expect = 7e-26
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKK+
Sbjct: 207 TMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKE 266
Query: 435 LLVV*DNL-CYTSIGVLGFIV 494
+ SIG LGFIV
Sbjct: 267 PFGYMGMVWAMMSIGFLGFIV 287
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/68 (48%), Positives = 38/68 (55%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q PLF
Sbjct: 125 GWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLF 184
Query: 190 V*AVGITA 213
V +V ITA
Sbjct: 185 VWSVLITA 192
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFTSAT+IIA+P
Sbjct: 294 TVGMDVDTRAYFTSATMIIAIP 315
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 118 bits (284), Expect = 1e-25
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKK+
Sbjct: 208 TMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKE 267
Query: 435 LLVV*DNL-CYTSIGVLGFIV 494
+ SIG LGFIV
Sbjct: 268 PFGYMGMVWAMLSIGFLGFIV 288
Score = 64.1 bits (149), Expect = 2e-09
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLF
Sbjct: 126 GWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLF 185
Query: 190 V*AVGITA 213
V +V ITA
Sbjct: 186 VWSVLITA 193
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 118 bits (283), Expect = 1e-25
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKK+
Sbjct: 207 TMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKE 266
Query: 435 LLVV*DNL-CYTSIGVLGFIV 494
+ +IG+LGFIV
Sbjct: 267 PFGYMGMVWAMMAIGLLGFIV 287
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLF
Sbjct: 125 GWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLF 184
Query: 190 V*AVGITA 213
V +V +TA
Sbjct: 185 VWSVLVTA 192
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFTSAT+IIA+P
Sbjct: 294 TVGMDVDTRAYFTSATMIIAIP 315
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 117 bits (281), Expect = 2e-25
Identities = 54/80 (67%), Positives = 63/80 (78%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S GK
Sbjct: 207 TMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGKPV 266
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG+LGF+V
Sbjct: 267 FGYLGMVYAMFSIGILGFLV 286
Score = 62.5 bits (145), Expect = 7e-09
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V A+ +TA AGAI
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAI 206
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +1
Query: 514 VGIDIDTRAYFTSATIIIAVP 576
VG+D+DTRAYFT+AT+IIAVP
Sbjct: 294 VGLDVDTRAYFTAATMIIAVP 314
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 114 bits (275), Expect = 1e-24
Identities = 56/80 (70%), Positives = 61/80 (76%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S K
Sbjct: 215 TMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVSTFSRKPV 274
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIGVLGFIV
Sbjct: 275 FGYIGMVYAMVSIGVLGFIV 294
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/82 (42%), Positives = 44/82 (53%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLF
Sbjct: 133 GWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLF 192
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V ++ +TAF AGAI
Sbjct: 193 VWSILVTAFLLLLAVPVLAGAI 214
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFT+AT+IIAVP
Sbjct: 301 TVGLDVDTRAYFTAATMIIAVP 322
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 107 bits (258), Expect = 1e-22
Identities = 52/80 (65%), Positives = 59/80 (73%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 208 TMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTISANSNKSV 267
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG+LGF+V
Sbjct: 268 FGYLGMVYAMCSIGILGFVV 287
Score = 52.0 bits (119), Expect = 1e-05
Identities = 34/82 (41%), Positives = 38/82 (46%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YPPLS +H G SVDLAIF LHL+GISS +L LF
Sbjct: 126 GWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILF 185
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
AV ITA AG I
Sbjct: 186 AWAVVITAVLLLLSLPVLAGGI 207
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFT+AT+IIAVP
Sbjct: 294 TVGLDVDTRAYFTAATLIIAVP 315
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 107 bits (256), Expect = 2e-22
Identities = 52/80 (65%), Positives = 59/80 (73%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 233 TMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNKPI 292
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG+LGFIV
Sbjct: 293 FGYIGMVYAMMSIGILGFIV 312
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 22 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFT+AT+IIAVP
Sbjct: 353 TVGLDVDTRAYFTAATLIIAVP 374
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 107 bits (256), Expect = 2e-22
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K
Sbjct: 234 TMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVISANSNKNV 293
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG+LGFIV
Sbjct: 294 FGYLGMVYAMMSIGLLGFIV 313
Score = 46.0 bits (104), Expect = 6e-04
Identities = 31/82 (37%), Positives = 35/82 (42%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YPPLS +H VDL IF LHL+GISS +L LF
Sbjct: 152 GWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALF 211
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
AV ITA A AI
Sbjct: 212 GWAVVITAVLLLLSLPVLAAAI 233
Score = 43.6 bits (98), Expect = 0.003
Identities = 17/22 (77%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFT+AT+IIA+P
Sbjct: 320 TVGLDVDTRAYFTAATLIIAIP 341
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 107 bits (256), Expect = 2e-22
Identities = 50/80 (62%), Positives = 60/80 (75%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S K
Sbjct: 208 TMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVSTYSKKPV 267
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG+LGF+V
Sbjct: 268 FGEISMVYAMASIGLLGFLV 287
Score = 59.3 bits (137), Expect = 6e-08
Identities = 34/69 (49%), Positives = 39/69 (56%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 190 V*AVGITAF 216
V ++ ITAF
Sbjct: 186 VWSIFITAF 194
Score = 40.7 bits (91), Expect = 0.024
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 514 VGIDIDTRAYFTSATIIIAVP 576
VG+D DTRAYFTSAT+IIA+P
Sbjct: 295 VGLDADTRAYFTSATMIIAIP 315
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 105 bits (253), Expect = 6e-22
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S K
Sbjct: 208 TMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVSTYSKKPV 267
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG+LGF+V
Sbjct: 268 FGEISMVYAMASIGLLGFLV 287
Score = 62.1 bits (144), Expect = 9e-09
Identities = 36/69 (52%), Positives = 39/69 (56%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLF 185
Query: 190 V*AVGITAF 216
V A+ ITAF
Sbjct: 186 VWAIFITAF 194
Score = 40.7 bits (91), Expect = 0.024
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 514 VGIDIDTRAYFTSATIIIAVP 576
VG+D DTRAYFTSAT+IIA+P
Sbjct: 295 VGLDADTRAYFTSATMIIAIP 315
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 105 bits (252), Expect = 7e-22
Identities = 50/80 (62%), Positives = 59/80 (73%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ K+
Sbjct: 211 TLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIATFSKKRV 270
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
V IG++GFIV
Sbjct: 271 FGHVPMIAAMLMIGLIGFIV 290
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/82 (41%), Positives = 38/82 (46%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSS +H G SVDL IFS HL GI S LPLF
Sbjct: 129 GWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLF 188
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V +V +T+F A AI
Sbjct: 189 VWSVAVTSFLVIVAIPVLAAAI 210
Score = 35.9 bits (79), Expect = 0.68
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
T GID T+AYFT+AT++IA+P
Sbjct: 297 TSGIDTSTKAYFTAATMVIAIP 318
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 103 bits (247), Expect = 3e-21
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ K
Sbjct: 313 TMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVATFSKKPI 372
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ +IG LGF+V
Sbjct: 373 FGYLPMVYALVAIGGLGFVV 392
Score = 46.0 bits (104), Expect = 6e-04
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T YPP+S+ R+VD AIF++H++G SS + ++PLF
Sbjct: 231 GWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLF 290
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
+V +TA+ AGAI
Sbjct: 291 AWSVFVTAWLLLLSLPVLAGAI 312
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 102 bits (244), Expect = 7e-21
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S K
Sbjct: 250 TMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVSTFSRKPV 309
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ +IGV+GF+V
Sbjct: 310 FGYLGMAYAMVAIGVVGFVV 329
Score = 46.0 bits (104), Expect = 6e-04
Identities = 30/82 (36%), Positives = 40/82 (48%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVY PLS++ G +VD+AI SLH+AG SS + ++PLF
Sbjct: 169 GWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLF 227
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V +V +TAF A AI
Sbjct: 228 VWSVLVTAFLLLLALPVLAAAI 249
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 97.9 bits (233), Expect = 1e-19
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 231 TTCFSWSYTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
++ SW N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 411 SQERGKKKLLVV*DNL-CYTSIGVLGFIV 494
+ GK++ + +IGVLGF+V
Sbjct: 236 AHYSGKREPFGYLGMVYAMIAIGVLGFLV 264
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFT+AT+IIAVP
Sbjct: 271 TVGMDVDTRAYFTAATMIIAVP 292
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 96.7 bits (230), Expect = 3e-19
Identities = 40/51 (78%), Positives = 47/51 (92%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 407
T+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 297 TMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 34.7 bits (76), Expect = 1.6
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 221 GWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K
Sbjct: 210 TLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLH 269
Query: 435 LLVV*DNLCYTSIGV--LGFIV 494
+ + + S+G+ +GF+V
Sbjct: 270 VFGK-IGMSWASMGIAWMGFLV 290
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 127 GWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 39.5 bits (88), Expect = 0.055
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +1
Query: 517 GIDIDTRAYFTSATIIIAVP 576
G+DIDTRAYFT+AT++IAVP
Sbjct: 299 GLDIDTRAYFTAATLMIAVP 318
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 91.5 bits (217), Expect = 1e-17
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ K
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQVYAKKPI 284
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG LGF V
Sbjct: 285 FGKIGMIYAMASIGFLGFCV 304
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 190 V*AVGITA 213
V +V ITA
Sbjct: 203 VWSVLITA 210
Score = 36.7 bits (81), Expect = 0.39
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D D+RAYF+ A++IIA+P
Sbjct: 311 TVGLDADSRAYFSGASLIIAIP 332
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 91.5 bits (217), Expect = 1e-17
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ K
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQVYAKKPI 284
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
+ SIG LGF V
Sbjct: 285 FGKIGMIYAMASIGFLGFCV 304
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 190 V*AVGITA 213
V +V ITA
Sbjct: 203 VWSVLITA 210
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 89.8 bits (213), Expect = 4e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
+LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 214 MLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 38.7 bits (86), Expect = 0.097
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
T G+++DTRAYFTS TI+I++P
Sbjct: 299 TTGLEVDTRAYFTSTTILISIP 320
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 88.6 bits (210), Expect = 9e-17
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 377
T+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 180 TMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/82 (57%), Positives = 49/82 (59%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLF
Sbjct: 98 GWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLF 157
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
+ AVGITA AGAI
Sbjct: 158 IWAVGITALLLLLSLPVLAGAI 179
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 87.0 bits (206), Expect = 3e-16
Identities = 49/82 (59%), Positives = 50/82 (60%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLF
Sbjct: 122 GWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLF 181
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V AVGITAF AGAI
Sbjct: 182 VWAVGITAFLLLLSLPVLAGAI 203
Score = 82.6 bits (195), Expect = 6e-15
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++ + ++ K K
Sbjct: 204 TMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEKSK 263
Query: 435 LLVV*DNLCYTSIGVLG-FIVELIIY 509
LLVV + + + V + ELI+Y
Sbjct: 264 LLVVSVSFMQSWLLVYSDLLFELIMY 289
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 85.8 bits (203), Expect = 6e-16
Identities = 43/74 (58%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 275 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKETFGCLG* 454
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 455 FMLY-*HWGIRIYC 493
+ Y +W I IYC
Sbjct: 67 NLCYISNWIISIYC 80
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 83.8 bits (198), Expect = 3e-15
Identities = 35/52 (67%), Positives = 44/52 (84%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 210 TLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
Score = 33.5 bits (73), Expect = 3.6
Identities = 24/82 (29%), Positives = 31/82 (37%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YP L H + D +F++HL GISS SF LF
Sbjct: 128 GWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLF 187
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
+ A ITA AG +
Sbjct: 188 IWAALITAILLIITLPVLAGGV 209
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 83.0 bits (196), Expect = 5e-15
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 249 SYTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
S LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 215 SLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAV 268
Score = 38.7 bits (86), Expect = 0.097
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
T G+DIDTR YF++AT+IIA+P
Sbjct: 304 TAGLDIDTRTYFSAATMIIAIP 325
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 82.6 bits (195), Expect = 6e-15
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +3
Query: 252 YTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
+ ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 212 FLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 32.3 bits (70), Expect = 8.4
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
G T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 133 GWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 80.6 bits (190), Expect = 2e-14
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII---SQERG 425
T++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I S R
Sbjct: 191 TLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSIQLSSLHRI 250
Query: 426 KKKLLVV*DNLCYTSIGVLGFIV 494
+L +V L SI ++G +V
Sbjct: 251 PGELSLV---LAMASIALIGSVV 270
Score = 41.1 bits (92), Expect = 0.018
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
T G+DIDTR+YFT+AT+IIAVP
Sbjct: 277 TAGLDIDTRSYFTAATMIIAVP 298
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 115 GWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +3
Query: 240 FSWSYTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 419
F + +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ +
Sbjct: 257 FGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKF 315
Query: 420 RGKKKLLVV*DNLCYTSIGVLGF 488
G+K +IGVL F
Sbjct: 316 SGRKLFGFKFVVYSTLAIGVLSF 338
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 76.6 bits (180), Expect = 4e-13
Identities = 40/80 (50%), Positives = 52/80 (65%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
T LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++ K
Sbjct: 219 TGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSIIHKDI 276
Query: 435 LLVV*DNLCYTSIGVLGFIV 494
C SIGV+G+ V
Sbjct: 277 FGREGMMYCIISIGVVGYFV 296
Score = 35.5 bits (78), Expect = 0.90
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+DID+R+YF+ AT II++P
Sbjct: 303 TVGLDIDSRSYFSIATSIISIP 324
Score = 33.1 bits (72), Expect = 4.8
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 108
G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 136 GWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 75.8 bits (178), Expect = 7e-13
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 227 MLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 249 SYTILLT-DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 425
S ILL+ D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 215 SALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVIPVH-- 272
Query: 426 KKKLLVV*DNLCYTSIGV--LGFIV 494
+K + + Y+S+ + LG IV
Sbjct: 273 ARKPIFGYRAIAYSSLAISFLGLIV 297
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/78 (51%), Positives = 47/78 (60%)
Frame = +3
Query: 261 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKLL 440
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ K
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVLPTFSRKPIFG 286
Query: 441 VV*DNLCYTSIGVLGFIV 494
+IG LGF+V
Sbjct: 287 YAFVAYSGVAIGFLGFLV 304
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKL 437
+LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++
Sbjct: 295 MLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRRLF 352
Query: 438 LVV*DNLCYTSIGVLGF 488
+IGVL F
Sbjct: 353 GFKFVVYSTLAIGVLSF 369
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 223 TSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 73.3 bits (172), Expect = 4e-12
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 407
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 408 ISQERGKKKLLVV*DNLCYTSIGVLGFIVELIIYHCRYRY*YTSIFY 548
IS K +IG L F+V + Y Y F+
Sbjct: 298 ISTHARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFF 344
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +3
Query: 270 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 431
DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 373 DRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR 426
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKL 437
+++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I K+
Sbjct: 217 LMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPVFARKRLF 276
Query: 438 LVV*DNLCYTSIGVLGFIV 494
IG LGF+V
Sbjct: 277 GYSSMVFAIVLIGFLGFMV 295
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 71.3 bits (167), Expect = 1e-11
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 407
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 234 MLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 70.9 bits (166), Expect = 2e-11
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 356
T+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 126 TMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/82 (46%), Positives = 44/82 (53%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TV PPLS+NIAH G SVDLAIFSLH+AG+ S + ++PLF
Sbjct: 44 GWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLF 103
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V AV ITA AGAI
Sbjct: 104 VWAVEITAILLLLSLPVLAGAI 125
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 ILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 434
+L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K
Sbjct: 233 VLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVATY--SRK 290
Query: 435 LLVV*DNLCYTSIGV 479
+ + Y+S+G+
Sbjct: 291 NIFGYRAVAYSSLGI 305
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 70.1 bits (164), Expect = 3e-11
Identities = 41/82 (50%), Positives = 47/82 (57%)
Frame = -2
Query: 254 IAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKI 75
IAPA TGS++N+K AV T TN G S I +R I+E PAKC+EKI
Sbjct: 29 IAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKI 88
Query: 74 ARSTDLPLCAILDESGG*TVHP 9
STD P CAI SGG TVHP
Sbjct: 89 PMSTDAPACAIPLASGGYTVHP 110
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 340 NKC*YKIGSPPPAGSKNDVFKFRS 269
NKC + IGSPPPAGSK +VFKFRS
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRS 23
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 69.3 bits (162), Expect = 6e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Frame = +3
Query: 258 ILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQ 416
+LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I +
Sbjct: 213 MLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVIQR 270
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 68.9 bits (161), Expect = 8e-11
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 163 TMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
+LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 241 LLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 258 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 428
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +3
Query: 261 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 66.9 bits (156), Expect = 3e-10
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKL 437
+L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K+
Sbjct: 228 MLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVIPVH--ARKM 285
Query: 438 LVV*DNLCYTS--IGVLGFIV 494
L + +++ IG +GF V
Sbjct: 286 LFGYSVMVFSTALIGFMGFTV 306
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 66.1 bits (154), Expect = 6e-10
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKL 437
+L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+
Sbjct: 253 MLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-- 310
Query: 438 LVV*DNLCYTS--IGVLGFIVEL 500
L ++ Y S I VLGF+V L
Sbjct: 311 LFGHKSMIYASGAISVLGFMVWL 333
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 243 SWSYTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 401
S ++ +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 239 SLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +3
Query: 270 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL 256
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 65.3 bits (152), Expect = 1e-09
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISH 404
+L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SH
Sbjct: 245 LLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSH 304
Query: 405 II--SQERGKKKLLVV*DNLCYTSIGVLGFIV 494
I+ S R VV ++ SIG L ++V
Sbjct: 305 ILINSMRRPLLSHRVVIGSM--ISIGFLSYVV 334
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 353
T+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 208 TMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 62.5 bits (145), Expect = 7e-09
Identities = 37/82 (45%), Positives = 44/82 (53%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+S AH G SVD+AIFSLHLAG+SS + ++PLF
Sbjct: 126 GWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLF 185
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V +V ITA AGAI
Sbjct: 186 VWSVLITAILLLLSLPVLAGAI 207
Score = 41.1 bits (92), Expect = 0.018
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +1
Query: 514 VGIDIDTRAYFTSATIIIAVP 576
VG+D+DTRAYFT+AT+IIAVP
Sbjct: 260 VGMDVDTRAYFTAATMIIAVP 280
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKL 437
+L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+
Sbjct: 252 LLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-- 309
Query: 438 LVV*DNLCYTS--IGVLGFIVEL 500
L ++ Y S I VLGF V L
Sbjct: 310 LFGHHSMIYASGAIAVLGFAVWL 332
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 234 LLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKL 437
+L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II +
Sbjct: 231 MLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFTQRPIF 289
Query: 438 LVV*DNLCYTSIGVLGF 488
+ L +IG +GF
Sbjct: 290 GYIPIVLSIVAIGFIGF 306
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/82 (46%), Positives = 42/82 (51%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLS N AH G SVDLAIFSLHLAG+SS + + LF
Sbjct: 108 GWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLF 167
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V +V ITA AGAI
Sbjct: 168 VWSVKITAILLLLSLPVLAGAI 189
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF 341
T+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 190 TMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +3
Query: 240 FSWSYTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
F+ + +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 204 FAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 63.7 bits (148), Expect = 3e-09
Identities = 37/68 (54%), Positives = 39/68 (57%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q PLF
Sbjct: 114 GWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLF 173
Query: 190 V*AVGITA 213
V AV ITA
Sbjct: 174 VWAVLITA 181
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDP 302
T+LLTDRNLNT+FFDP
Sbjct: 196 TMLLTDRNLNTTFFDP 211
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 231 TTCFSWSYTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
T S ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++
Sbjct: 218 TPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
Query: 411 SQERGKKKLLVV*DNLCYTSIGV 479
+K + + Y+S+G+
Sbjct: 278 C--AFSRKNIFGYKAVAYSSLGI 298
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.9 bits (146), Expect = 5e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 428
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 62.9 bits (146), Expect = 5e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF 341
T+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 207 TMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 62.5 bits (145), Expect = 7e-09
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 190 V*AVGITAFXXXXXXXXXAGAI 255
V A+ +TA AGAI
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAI 206
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 62.1 bits (144), Expect = 9e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 380
T+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 208 TMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
Score = 59.3 bits (137), Expect = 6e-08
Identities = 34/69 (49%), Positives = 39/69 (56%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 190 V*AVGITAF 216
V ++ ITAF
Sbjct: 186 VWSIFITAF 194
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 62.1 bits (144), Expect = 9e-09
Identities = 23/52 (44%), Positives = 38/52 (73%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S
Sbjct: 218 LVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 293 LLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 270 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 60.9 bits (141), Expect = 2e-08
Identities = 36/80 (45%), Positives = 44/80 (55%)
Frame = +3
Query: 261 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKLL 440
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISYICVKSVFS 307
Query: 441 VV*DNLCYTSIGVLGFIVEL 500
+ SI VL F+V L
Sbjct: 308 YISLIYATISITVLSFLVWL 327
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 353
T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 208 TMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 55.6 bits (128), Expect = 8e-07
Identities = 32/68 (47%), Positives = 38/68 (55%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLF
Sbjct: 126 GWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 190 V*AVGITA 213
V A+ ITA
Sbjct: 186 VWAILITA 193
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 60.1 bits (139), Expect = 4e-08
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 404
++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP G++S
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSD 305
Query: 405 IISQERGKKKLLVV*DNLCYTSIGV--LGFIV 494
I++ +K + + Y+ G+ LGFIV
Sbjct: 306 ILA--CFSRKPIFGYKPMVYSICGIAGLGFIV 335
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHI 407
+L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +
Sbjct: 260 LLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEV 319
Query: 408 ISQERGK 428
I+ K
Sbjct: 320 IATNARK 326
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 59.7 bits (138), Expect = 5e-08
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 380
T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 213 TMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/68 (41%), Positives = 35/68 (51%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 131 GWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLF 190
Query: 190 V*AVGITA 213
AV TA
Sbjct: 191 AWAVLFTA 198
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 59.7 bits (138), Expect = 5e-08
Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 345 FFGHPEVYILILPGFGIISHIISQERGKKKLLVV*DNL-CYTSIGVLGFIV 494
FFGHPEVYILILPGFG+ISHI++ GKK+ + +IG+LGFIV
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIV 52
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFTSAT+IIA+P
Sbjct: 59 TVGMDVDTRAYFTSATMIIAIP 80
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 59.3 bits (137), Expect = 6e-08
Identities = 35/80 (43%), Positives = 41/80 (51%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 190 V*AVGITAFXXXXXXXXXAG 249
V A+ +TA AG
Sbjct: 185 VWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 8e-08
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 58.8 bits (136), Expect = 8e-08
Identities = 33/76 (43%), Positives = 41/76 (53%)
Frame = +1
Query: 28 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 207
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 208 TAFXXXXXXXXXAGAI 255
T AGAI
Sbjct: 132 TTVLLLLSLPVLAGAI 147
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
+L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS
Sbjct: 248 LLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 207 TMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 58.0 bits (134), Expect = 1e-07
Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 380
T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 190 V*AVGITA 213
V +V ITA
Sbjct: 203 VWSVLITA 210
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 261 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKLL 440
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K+L
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG--KVL 330
Query: 441 VV*DNLCYTSIGV--LGFIVEL 500
+L + +I + L F+V L
Sbjct: 331 FGYKSLVWATISIAFLSFLVWL 352
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +3
Query: 258 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 271 MLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 189
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 190 V*AVGITA 213
V +V ITA
Sbjct: 203 VWSVLITA 210
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 395
T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 225 TMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/46 (60%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = +3
Query: 360 EVYILILPGFGIISHIISQERGKKKLLVV*DNL-CYTSIGVLGFIV 494
EVYILILPGFG+ISHIISQE GKK+ + +IG+LGF+V
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVV 200
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTRAYFTSAT+IIAVP
Sbjct: 207 TVGMDVDTRAYFTSATMIIAVP 228
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 53.2 bits (122), Expect = 4e-06
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +3
Query: 306 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKKLLVV*DNLCYTSIGVLG 485
GGG P+L+QHLF F+ HP VYI++LP G++S ++S K ++I LG
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSCMCRKPLFGYKPMVFSMSAIASLG 335
Query: 486 FIV 494
FIV
Sbjct: 336 FIV 338
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 20 GWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 279 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS 277
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 49.2 bits (112), Expect = 7e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 332 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 430
+ ++IFW+S SLYFN IWYNF YY+T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1
Query: 19 VYPPLSSNIAHRGRSVDLAIFSLHLAGISS 108
VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 118 VYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 255 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 380
T+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 40 TMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 8e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 345 FFGHPEVYILILPGFGIISHI 407
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.6 bits (103), Expect = 8e-04
Identities = 20/54 (37%), Positives = 36/54 (66%)
Frame = +3
Query: 252 YTILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 413
+ +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 236 FFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 297 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 431
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 41.1 bits (92), Expect = 0.018
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 10 G*TVYPPLSSNIAHRGRSVDLAIFS 84
G TVYPPLSS AH G SVDLAI+S
Sbjct: 41 GWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 39.9 bits (89), Expect = 0.042
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2
Query: 260 IINRSKLKYIIF*SCWRRRPNFISTFILIFWT 355
IIN K KY IF W P +STFILIFWT
Sbjct: 121 IINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 41.1 bits (92), Expect = 0.018
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +1
Query: 514 VGIDIDTRAYFTSATIIIAVP 576
VG+D+DTRAYFT+AT+IIAVP
Sbjct: 4 VGMDVDTRAYFTAATMIIAVP 24
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 39.9 bits (89), Expect = 0.042
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG+D+DTR YF+SAT++IA+P
Sbjct: 51 TVGLDVDTRVYFSSATLLIALP 72
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 37.9 bits (84), Expect = 0.17
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 523 DIDTRAYFTSATIIIAVP 576
D+DTRAYFTSAT+IIAVP
Sbjct: 1 DVDTRAYFTSATMIIAVP 18
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.1 bits (82), Expect = 0.30
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 249 SYTILLTDRN--LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 410
+YT L D + + S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 296 TYTGALMDLSDMIAGSHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 37.1 bits (82), Expect = 0.30
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
T G+++DTRA+FTS TI+I++P
Sbjct: 3 TTGLEVDTRAFFTSTTILISIP 24
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 0.90
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 309 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 425
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 35.5 bits (78), Expect = 0.90
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 526 IDTRAYFTSATIIIAVP 576
+DTRAYFTSAT+IIAVP
Sbjct: 2 VDTRAYFTSATMIIAVP 18
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +1
Query: 511 TVGIDIDTRAYFTSATIIIAVP 576
TVG++ DTRAYF++ TI+IA+P
Sbjct: 7 TVGLEGDTRAYFSAMTIMIAIP 28
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 357 PEVYILILPGFGIISHIISQERGKK 431
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 315 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 428
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 514 VGIDIDTRAYFTSATIIIAVP 576
VG+ + RAYFTSAT+IIA+P
Sbjct: 296 VGMXVXPRAYFTSATMIIAIP 316
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 321 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 428
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 4.8
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 55 GRSVDLAIFSLHLAGISS 108
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 520 IDIDTRAYFTSATIIIAVP 576
+ + TRAYFTSAT+IIAVP
Sbjct: 1 LTLHTRAYFTSATMIIAVP 19
>UniRef50_Q4Z6G4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 1526
Score = 32.3 bits (70), Expect = 8.4
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -2
Query: 479 YPNASIA*IILNNQKFLFSSFL*NNMRNYTKSW*N*NINFRMSKKSK 339
YPN +I L +K++ S+F N +NY S N N+NF KK K
Sbjct: 62 YPNKTI----LMKKKYIMSNFSFNLKKNYNLSLNNQNVNFFKIKKGK 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,588,518
Number of Sequences: 1657284
Number of extensions: 8040360
Number of successful extensions: 15818
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 15061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15761
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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