Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0545
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   5.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.5  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.9  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 192 MSCRDYSXXXXXXTTCFSW 248
           +SC+D+       TT  SW
Sbjct: 19  LSCKDFDTLYRDCTTASSW 37


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 459 CYTSIGVLGFIVELIIYHCR 518
           C    G LG+I E+ +  CR
Sbjct: 246 CSCPSGTLGYICEINVDDCR 265


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 392 YNFSYYFTRKRKKE 433
           ++F++Y TR+R+ E
Sbjct: 25  FHFNHYLTRRRRIE 38


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 400 LILFHKKEEKRNFWLFR 450
           + L  K +E+ N WLFR
Sbjct: 502 IFLAPKTDERGNPWLFR 518


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 5   TRDEQFTPHFH 37
           T+DE F PH H
Sbjct: 122 TKDEPFRPHPH 132


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 392 YNFSYYFTRKRKKE 433
           ++F++Y TR+R+ E
Sbjct: 176 FHFNHYLTRRRRIE 189


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 392 YNFSYYFTRKRKKE 433
           ++F++Y TR+R+ E
Sbjct: 235 FHFNHYLTRRRRIE 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,647
Number of Sequences: 336
Number of extensions: 2345
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)