Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0542
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.2  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +1

Query: 487 FWTCHGHLSENINSPCFLKKKKK 555
           FW+ H        + C+L+++K+
Sbjct: 213 FWSLHPDSGNMFENGCYLRRQKR 235


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/38 (15%), Positives = 21/38 (55%)
 Frame = +2

Query: 347 TDLYIWSSRMWSGYLCM*LLGSVYLLTICIEFYKICIV 460
           ++ + WS + +  Y+   ++G  +     IE++++ ++
Sbjct: 121 SNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/38 (15%), Positives = 21/38 (55%)
 Frame = +2

Query: 347 TDLYIWSSRMWSGYLCM*LLGSVYLLTICIEFYKICIV 460
           ++ + WS + +  Y+   ++G  +     IE++++ ++
Sbjct: 121 SNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVL 158


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 386 YLCM*LLGSVYLLTICIEFY 445
           YL + ++  +Y+LT+C   Y
Sbjct: 101 YLLLFVINVLYVLTLCYAVY 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,051
Number of Sequences: 336
Number of extensions: 2637
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)