Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0542
(557 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1661|AAN13556.2| 488|Drosophila melanogaster CG32853-P... 29 5.6
BT030440-1|ABO52860.1| 1378|Drosophila melanogaster LD40879p pro... 28 7.4
BT029136-1|ABJ17069.1| 1196|Drosophila melanogaster LD14750p pro... 28 7.4
BT025041-1|ABE73212.1| 1255|Drosophila melanogaster LD15160p pro... 28 7.4
BT024217-1|ABC86279.1| 1373|Drosophila melanogaster RE19210p pro... 28 7.4
AF181637-1|AAD55423.1| 1266|Drosophila melanogaster BcDNA.GH0791... 28 7.4
AE014298-554|AAS72337.3| 1254|Drosophila melanogaster CG32782-PD... 28 7.4
AE014298-553|AAN09104.4| 1254|Drosophila melanogaster CG32782-PC... 28 7.4
AY071517-1|AAL49139.1| 510|Drosophila melanogaster RE56935p pro... 28 9.8
AE014134-3365|AAF53980.2| 704|Drosophila melanogaster CG8681-PA... 28 9.8
AE014134-3364|ABI31327.1| 1002|Drosophila melanogaster CG8681-PB... 28 9.8
>AE014297-1661|AAN13556.2| 488|Drosophila melanogaster CG32853-PA
protein.
Length = 488
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 381 LHILEDQIYKSVLKGLNNDII*STITGFLLNLDRYYPTESSNSLPDRFLSCSVY 220
+ I+ + Y++V+ G+ + S + GF+L L Y E +L + L CS++
Sbjct: 202 IRIINRRCYRNVMPGIAQLSVISVV-GFILTLAVYLSVEKLRNLLGKCLICSLF 254
>BT030440-1|ABO52860.1| 1378|Drosophila melanogaster LD40879p protein.
Length = 1378
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 1119 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 1154
>BT029136-1|ABJ17069.1| 1196|Drosophila melanogaster LD14750p protein.
Length = 1196
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 937 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 972
>BT025041-1|ABE73212.1| 1255|Drosophila melanogaster LD15160p
protein.
Length = 1255
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 885 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 920
>BT024217-1|ABC86279.1| 1373|Drosophila melanogaster RE19210p protein.
Length = 1373
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 1003 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 1038
>AF181637-1|AAD55423.1| 1266|Drosophila melanogaster BcDNA.GH07910
protein.
Length = 1266
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 896 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 931
>AE014298-554|AAS72337.3| 1254|Drosophila melanogaster CG32782-PD,
isoform D protein.
Length = 1254
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 884 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 919
>AE014298-553|AAN09104.4| 1254|Drosophila melanogaster CG32782-PC,
isoform C protein.
Length = 1254
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 227 EQERNLSGSEFEDSVG**RSRFNKNPVMVDQIISLL 334
E+ERNL E + + +SRFN +PV+ D+ + L+
Sbjct: 884 ERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLM 919
>AY071517-1|AAL49139.1| 510|Drosophila melanogaster RE56935p
protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 290 FNKNPVMVDQIISLLSPFKTDLYIWSSRMWSGYLCM*LL 406
F+K P + S LSPF D++I+ M S YL + LL
Sbjct: 456 FSKPPTPPTDLFSFLSPFSLDVWIY---MGSAYLFISLL 491
>AE014134-3365|AAF53980.2| 704|Drosophila melanogaster CG8681-PA,
isoform A protein.
Length = 704
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 290 FNKNPVMVDQIISLLSPFKTDLYIWSSRMWSGYLCM*LL 406
F+K P + S LSPF D++I+ M S YL + LL
Sbjct: 456 FSKPPTPPTDLFSFLSPFSLDVWIY---MGSAYLFISLL 491
>AE014134-3364|ABI31327.1| 1002|Drosophila melanogaster CG8681-PB,
isoform B protein.
Length = 1002
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 290 FNKNPVMVDQIISLLSPFKTDLYIWSSRMWSGYLCM*LL 406
F+K P + S LSPF D++I+ M S YL + LL
Sbjct: 528 FSKPPTPPTDLFSFLSPFSLDVWIY---MGSAYLFISLL 563
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,574,458
Number of Sequences: 53049
Number of extensions: 401887
Number of successful extensions: 716
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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