Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0540
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7RNT5 Cluster: Putative uncharacterized protein PY0173... 36 0.96
UniRef50_Q7RGS1 Cluster: Yersinia pestis AMVITR01, putative; n=4... 35 1.3
UniRef50_Q7RLD9 Cluster: Amine oxidase, flavin-containing, putat... 35 1.7
UniRef50_Q9PQF4 Cluster: Methylenetetrahydrofolate dehydrogenase... 34 2.9
UniRef50_Q4YFH0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_UPI00006CDDB1 Cluster: Transmembrane amino acid transpo... 33 3.9
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q39504 Cluster: ORF484; n=2; Cylindrotheca fusiformis|R... 33 6.7
UniRef50_Q4XY64 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A0C4C7 Cluster: Chromosome undetermined scaffold_149, w... 29 7.4
UniRef50_UPI00006A1B5F Cluster: UPI00006A1B5F related cluster; n... 32 8.9
UniRef50_Q05FG7 Cluster: Histidyl-tRNA synthetase; n=1; Candidat... 32 8.9
UniRef50_Q8IM40 Cluster: Putative uncharacterized protein; n=4; ... 32 8.9
UniRef50_Q8I1Z2 Cluster: CGI-201 protein, short form; n=6; Plasm... 32 8.9
UniRef50_Q94ZI5 Cluster: Orf256; n=1; Schizophyllum commune|Rep:... 32 8.9
>UniRef50_Q7RNT5 Cluster: Putative uncharacterized protein PY01730;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01730 - Plasmodium yoelii yoelii
Length = 1692
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 194 LFHYISIFINYHISNNRTTTLIYFLFEINLYRNVCPLEL*INCVKYFLLRFF 349
+FHYIS+ NY I++N + + + +I + + +NC+ Y L+ FF
Sbjct: 658 IFHYISLEKNYIINSNMKNIVTWIILQIYFIKK--EINKIVNCLTYMLILFF 707
>UniRef50_Q7RGS1 Cluster: Yersinia pestis AMVITR01, putative; n=4;
Plasmodium (Vinckeia)|Rep: Yersinia pestis AMVITR01,
putative - Plasmodium yoelii yoelii
Length = 440
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 61 SIYIVINSLFNFKYICC*VFDILIIMYNYAFYNVNKTNCLHVHLFISLYKHFYKLS 228
+I ++ SL+ KY + L ++ NY F N NK H+HL + +Y +F +++
Sbjct: 147 NIVTILISLYKLKYRNV---NFLKLVENYIFINKNKFKISHIHLILYIYAYFNRVN 199
>UniRef50_Q7RLD9 Cluster: Amine oxidase, flavin-containing, putative;
n=9; Plasmodium (Vinckeia)|Rep: Amine oxidase,
flavin-containing, putative - Plasmodium yoelii yoelii
Length = 4189
Score = 34.7 bits (76), Expect = 1.7
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = -2
Query: 588 KQIH*IQINSNKSQ*FLWLNN---YHYYFNTIFFKCXRKAAVRYKLFVITIFFNATCYKV 418
K I+ INS+ + +++ NN Y Y FFK +K Y+ T +FN K
Sbjct: 762 KNIYNNNINSHLYKHYIYYNNKKIYTYKMRNEFFKLIKKLRSFYEHISNTKYFNDPIIKK 821
Query: 417 TTIYSFIYRKSNKFVYKYIQLSKKNLSKKYFTQLIY 310
+Y+ N + K + + KK+F IY
Sbjct: 822 QFLYASFGEVINSEINKIKEQKHQIKKKKHFKTYIY 857
>UniRef50_Q9PQF4 Cluster: Methylenetetrahydrofolate dehydrogenase;
n=1; Ureaplasma parvum|Rep: Methylenetetrahydrofolate
dehydrogenase - Ureaplasma parvum (Ureaplasma
urealyticum biotype 1)
Length = 269
Score = 33.9 bits (74), Expect = 2.9
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = -2
Query: 564 NSNKSQ*FLWLNNYHYYFNTIFFKCXRKAAVRYKLFVIT-IFFNATCYKVTTIYSFI--Y 394
N K + +++ ++ FN+ + + K A KLF + I ++ Y++ + F+
Sbjct: 21 NKTKKRIYVFYDSDLVNFNSAYIQSKLKYA---KLFSVKLIIYDLNAYQIQENHHFLSKL 77
Query: 393 RKSNK-FVYKYIQLSKKNLSKKYFTQLIYNSRGHTFR*RFISNKKYIN 253
+++NK F++ LSKK+L + YF L + + NKK N
Sbjct: 78 KQANKDFLFFEFPLSKKHLDQNYFQYLTFQNDLDGINSHLFLNKKQEN 125
>UniRef50_Q4YFH0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 83
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -2
Query: 561 SNKSQ*FLWLNNYHYYFNTIFFKCXRK--AAVRYKL-FVITIFFNATCYKVTTIYSFIYR 391
SN ++ + +Y++YF +I+F RK ++ Y L F + N C+ ++ I +++
Sbjct: 7 SNTNKILIIKKSYNFYFKSIYFFINRKVLTSIIYVLIFFFVVLCNIYCFHISYITFYLHI 66
Query: 390 KSNKFVYKYIQL 355
++Y YI +
Sbjct: 67 YIYIYIYIYISI 78
>UniRef50_UPI00006CDDB1 Cluster: Transmembrane amino acid
transporter protein; n=1; Tetrahymena thermophila
SB210|Rep: Transmembrane amino acid transporter protein
- Tetrahymena thermophila SB210
Length = 561
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 176 VYMYTYLFHYISIFINYHISNNRTTTLIYFLFEINLYRNVCPLEL*INCVKYFLLRFFFE 355
V++ ISIFIN+ I + T L YF+ I +Y+N L + V +F+ F
Sbjct: 482 VFLMAMSIDRISIFINF-IGSICGTALCYFIPVIIIYKNEPELPFWKSLVNWFIFLIAFA 540
Query: 356 S*IY-LYTNLLLF 391
++ Y++L+LF
Sbjct: 541 CGVFGAYSSLILF 553
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 33.5 bits (73), Expect = 3.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 173 IVYMYTYLFHYISIFINYHISNNRTTTLIYFLFEIN 280
++Y + L YI IFINY N T +IY +FE+N
Sbjct: 1841 LIYFFLILHIYIYIFINY--VNMHCTFIIYVIFELN 1874
>UniRef50_Q39504 Cluster: ORF484; n=2; Cylindrotheca fusiformis|Rep:
ORF484 - Cylindrotheca fusiformis (Marine diatom)
Length = 484
Score = 32.7 bits (71), Expect = 6.7
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = -2
Query: 540 LWLNNYHYYFNTIFFKCXRKAAVRYKLFVITIFFNATCYKVTTIYSFIYRKSNKFVYKYI 361
L+ NY +Y IF K + + I +F + KV I F+ S+ I
Sbjct: 370 LFYYNYPFYLPNIFQTKLTKDKLEVRFKFIQVFTSVNIEKVFFIQEFLSSYSS-----VI 424
Query: 360 QLSKKNLSKKYFTQLIYNSRGH 295
+KN KKYF QL+ + H
Sbjct: 425 SNQRKNNIKKYFIQLVQLFKEH 446
>UniRef50_Q4XY64 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 47
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 17 KYFYLCT*LK-CKIYYLFTL*STRYLILSIYVVKFSIF**LC 139
KY Y+C L+ C + ++F + R L + +KFSIF LC
Sbjct: 5 KYIYICENLRICMLRFIFFIPRLRILYFLSFYIKFSIFISLC 46
>UniRef50_A0C4C7 Cluster: Chromosome undetermined scaffold_149,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_149,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 550
Score = 29.1 bits (62), Expect(2) = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 504 IFFKCXRKAAVRYKLFVITIFFNATCYKVTTIYSFIY 394
++ K R + L TI FN+ CY ++ IY F Y
Sbjct: 216 LYLKIQRVQQDQLPLTGFTIGFNSICYSISDIYQFQY 252
Score = 22.2 bits (45), Expect(2) = 7.4
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -2
Query: 381 KFVYK--YIQLSKKNLSKKYFTQLIYNS 304
K +YK ++ NL KY TQ YNS
Sbjct: 291 KQLYKNGVVESRNVNLFYKYLTQFYYNS 318
>UniRef50_UPI00006A1B5F Cluster: UPI00006A1B5F related cluster; n=4;
Euteleostomi|Rep: UPI00006A1B5F UniRef100 entry -
Xenopus tropicalis
Length = 413
Score = 32.3 bits (70), Expect = 8.9
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +2
Query: 53 IYYLFTL*STRYLILSIYVVKFSIF**LCTTMLFTM*IKQIVYMYTYLFHYISIFINYHI 232
+YY + S RY +S + ++ I + +T + I+YMY Y++ YI IFI +
Sbjct: 313 MYYTVSFHSHRYYTVSFHSHRYYIVS-FHSHRYYTQVLYCILYMYIYIYIYIYIFIPI-L 370
Query: 233 SNNRTTTLIYFLFEINLYRNVCPL 304
+ T +I+ L+ ++ + V L
Sbjct: 371 LFKQLTKIIFSLYYLHAWMFVITL 394
>UniRef50_Q05FG7 Cluster: Histidyl-tRNA synthetase; n=1; Candidatus
Carsonella ruddii PV|Rep: Histidyl-tRNA synthetase -
Carsonella ruddii (strain PV)
Length = 354
Score = 32.3 bits (70), Expect = 8.9
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = -2
Query: 540 LWLNNY-HYYFNTIFFKCXRKAAVRYKLFVITIFFNATCYKVTTIYSFIYRKSNKFVYKY 364
L LNN+ +Y F T++ K F+I I YK+ F ++K F YK+
Sbjct: 147 LELNNFINYKFKTVYLNII--IHFLEKKFLIKIVRKILIYKILDNSKFNFKKF-VFNYKF 203
Query: 363 IQLSKKNLSKKYF----TQLIYNSR 301
I + K+ K+F T++I+N +
Sbjct: 204 INIKNKDKLNKFFFYLKTKIIFNPK 228
>UniRef50_Q8IM40 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1515
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = -2
Query: 471 RYKLFVITIFFNATCYKVTTIYSFIYRKSNKFVYKYIQLSKKNLSKKYFTQLIYNSRGHT 292
+YK+++ IFF ++ + ++ NK + Y++ + L+ KY + L+Y
Sbjct: 8 KYKVYIYVIFFVLVENTMSMKKNLMFTCFNKKKFIYVKKNVLFLNNKYISNLVYTKEDDI 67
Query: 291 FR*RFISN 268
++ ISN
Sbjct: 68 YKINEISN 75
>UniRef50_Q8I1Z2 Cluster: CGI-201 protein, short form; n=6;
Plasmodium|Rep: CGI-201 protein, short form - Plasmodium
falciparum (isolate 3D7)
Length = 780
Score = 32.3 bits (70), Expect = 8.9
Identities = 23/65 (35%), Positives = 28/65 (43%)
Frame = -3
Query: 374 YINIFNFQKKI*AKNTLHN*FTILEDTRSDRDLSRIKNILTWWFYYY*YDNL*KCLYNEI 195
Y N FQKK K+ LH I E + +L + KN WF Y L + N I
Sbjct: 281 YKNFLQFQKKYANKDELHESLLIKERIFYEDELKKNKNDYDIWFNYI---KLEESNINNI 337
Query: 194 NKCTC 180
NK C
Sbjct: 338 NKEKC 342
>UniRef50_Q94ZI5 Cluster: Orf256; n=1; Schizophyllum commune|Rep:
Orf256 - Schizophyllum commune (Bracket fungus)
Length = 256
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +1
Query: 19 IFLLMYVIKM*NLLSIYIVINSLFNFKYIC---C*VFDILIIMYNYAFYNVNKTN 174
IF+L+ ++K+ L ++YI+ ++ F FK C C + ++++ Y + +K N
Sbjct: 148 IFILLILLKIVGLNNLYIIYSNKFYFKIACIFACLLVIFILVLELYLIHKFSKKN 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,744,979
Number of Sequences: 1657284
Number of extensions: 9711045
Number of successful extensions: 22534
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22325
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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