Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0540
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +2

Query: 323 VKYF--LLRFFFES*IYLYTNLLLFR 394
           V+YF   + FF++  +YL T+++L R
Sbjct: 152 VEYFQNYIHFFYQLLLYLITDMILMR 177


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/72 (12%), Positives = 35/72 (48%)
 Frame = -2

Query: 522 HYYFNTIFFKCXRKAAVRYKLFVITIFFNATCYKVTTIYSFIYRKSNKFVYKYIQLSKKN 343
           ++  N +F++  +   V Y++    + FN +   +  + SF+  + +    ++ ++ + N
Sbjct: 249 NFLTNLLFWEFDQIVNVAYRMETWNVVFNGSRKNLDVMKSFVNFRPSFTAARFFEIDRIN 308

Query: 342 LSKKYFTQLIYN 307
              +   +++++
Sbjct: 309 AESRKPIRILFD 320


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 31  MYVIKM*NLLSIYIVINSLFNFKYICC 111
           + V K  N L IY+  N +F F    C
Sbjct: 5   LVVEKFLNSLQIYLQHNQIFGFVTFTC 31


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -2

Query: 525 YHYYFNTIFFKCXRKAAVRYKLFVITIFF 439
           Y++Y+  + F C       + LF++ I++
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 367 IYSTFKKKSKQ 335
           +YST+ KKSKQ
Sbjct: 149 LYSTWSKKSKQ 159


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 367 IYSTFKKKSKQ 335
           +YST+ KKSKQ
Sbjct: 149 LYSTWSKKSKQ 159


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 31  MYVIKM*NLLSIYIVINSLFNFKYICC 111
           + V K  N L IY+  N +F F    C
Sbjct: 23  LVVEKFLNSLQIYLQHNQIFGFVTFTC 49


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 247 HHVNIFFIRDKSLSERVSSRIVNQLCKV 330
           HH+    ++ K  S   SSRI++  CKV
Sbjct: 13  HHLEPHRMQIKPQSPSSSSRILDIPCKV 40


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 247 HHVNIFFIRDKSLSERVSSRIVNQLCKV 330
           HH+    ++ K  S   SSRI++  CKV
Sbjct: 13  HHLEPHRMQIKPQSPSSSSRILDIPCKV 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,459
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)