Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0540
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   0.98 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   0.98 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   0.98 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.0  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   6.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 266 KNILTWWFYYY*YDNL 219
           KNI T W YYY Y  L
Sbjct: 166 KNITTPWDYYYIYHTL 181


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 266 KNILTWWFYYY*YDNL 219
           KNI T W YYY Y  L
Sbjct: 181 KNITTPWDYYYIYHTL 196


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 266 KNILTWWFYYY*YDNL 219
           KNI T W YYY Y  L
Sbjct: 69  KNITTPWDYYYIYHTL 84


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 463 IICDNYFFQRNLL*GNHYLFLYL 395
           ++C N+F+Q     G+ Y+ L++
Sbjct: 195 VVCQNFFYQIYATLGSFYIPLFV 217


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 358 LNIFIYEFIALSINKGINSGYLI 426
           L   I E + L   KGIN+G ++
Sbjct: 119 LTCMIQEVLKLMKKKGINNGIIV 141


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 169 TNCLHVHLFISLYKH 213
           TN   V  F+S+YKH
Sbjct: 74  TNAAAVKEFLSIYKH 88


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 169 TNCLHVHLFISLYKH 213
           TN   V  F+S+YKH
Sbjct: 74  TNAAAVKEFLSIYKH 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,869
Number of Sequences: 438
Number of extensions: 3465
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)