Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0538
(615 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 185 3e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 178 3e-47
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 178 3e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 91 8e-21
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 1.8
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 1.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 1.8
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 2.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.1
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 9.6
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 9.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 185 bits (450), Expect = 3e-49
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +2
Query: 2 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 181
KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH
Sbjct: 290 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 349
Query: 182 PGQISNGYTPVLDCHTAHIACKFAE 256
PGQISNGYTPVLDCHTAHIACKFA+
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFAD 374
Score = 146 bits (354), Expect = 2e-37
Identities = 74/99 (74%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Frame = +1
Query: 226 HCPH-CLQICRIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 402
H H + IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGR
Sbjct: 364 HTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGR 423
Query: 403 FAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEKATRAR 519
FAVRDMRQTVAVGVIKAV FK+A GKVTKAAEKA + +
Sbjct: 424 FAVRDMRQTVAVGVIKAVTFKDA-AGKVTKAAEKAQKKK 461
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 178 bits (434), Expect = 3e-47
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +2
Query: 2 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 181
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 290 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 349
Query: 182 PGQISNGYTPVLDCHTAHIACKFAE 256
PGQISNGYTPVLDCHTAHIACKFAE
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFAE 374
Score = 143 bits (347), Expect = 1e-36
Identities = 72/99 (72%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Frame = +1
Query: 226 HCPH-CLQICRIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 402
H H + IKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGR 423
Query: 403 FAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEKATRAR 519
FAVRDMRQTVAVGVIK+V FK+ GKVTKAAEKA + +
Sbjct: 424 FAVRDMRQTVAVGVIKSVTFKDT-QGKVTKAAEKAQKKK 461
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 178 bits (434), Expect = 3e-47
Identities = 80/85 (94%), Positives = 83/85 (97%)
Frame = +2
Query: 2 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 181
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 182 PGQISNGYTPVLDCHTAHIACKFAE 256
PGQISNGYTPVLDCHTAHIACKFAE
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAE 85
Score = 59.7 bits (138), Expect = 2e-11
Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +1
Query: 226 HCPH-CLQICRIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 357
H H + IKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 75 HTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 91.1 bits (216), Expect = 8e-21
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 2 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 127
KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 233 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 568 KYRSCMKNCAVNSSSYFL 515
K+ C+KN A SSYF+
Sbjct: 94 KFYDCLKNSADTISSYFV 111
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 568 KYRSCMKNCAVNSSSYFL 515
K+ C+KN A SSYF+
Sbjct: 99 KFYDCLKNSADTISSYFV 116
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 568 KYRSCMKNCAVNSSSYFL 515
K+ C+KN A SSYF+
Sbjct: 99 KFYDCLKNSADTISSYFV 116
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +1
Query: 199 RLHTSLGLPHCPHC----LQICRIKEKVDRRTGK 288
RLHT HC HC +Q+ ++ + TG+
Sbjct: 30 RLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGE 63
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 80 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 187
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 607 CSPFFLRKHFR*MKYRSCMKN 545
C FF R + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 301 NPKSIKSGDAAIVNLVPSKPLC 366
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 301 NPKSIKSGDAAIVNLVPSKPLC 366
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 323 EMQPLSTWYLPSL 361
+ P+ WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,240
Number of Sequences: 438
Number of extensions: 3781
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -