Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0536
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    55   4e-10
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    55   4e-10
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    52   3e-09
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    52   4e-09
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.3  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 55.2 bits (127), Expect = 4e-10
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +2

Query: 353 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 505
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++ P
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTP 139


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 55.2 bits (127), Expect = 4e-10
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +2

Query: 353 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 505
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++ P
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTP 139


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 52.4 bits (120), Expect = 3e-09
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +2

Query: 347 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 505
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++ P
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSAGPKWQNRRKILTP 132



 Score = 28.3 bits (60), Expect = 0.055
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 502 PHIHLNVLKSFIDLFNANSRAVVXKLK 582
           P  H N+L+ FI +FN  ++ +V  L+
Sbjct: 132 PAFHFNILQEFIQIFNEETKRLVEDLE 158


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 52.0 bits (119), Expect = 4e-09
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +2

Query: 347 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 505
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++ P
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSRGPKWQNRRKILTP 132



 Score = 28.3 bits (60), Expect = 0.055
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 502 PHIHLNVLKSFIDLFNANSRAVVXKLK 582
           P  H N+L+ FI +FN  ++ +V  L+
Sbjct: 132 PAFHFNILQEFIQIFNEETKRLVEDLE 158


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 KPWLGNGLLISTGQKWRSHRKLIAP 505
           +P L   L    G+KW+  R  ++P
Sbjct: 69  EPLLSEALTNLPGEKWKEMRATLSP 93


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 FRKALTTITNPSLRSG 329
           FR+ L    NPSLR G
Sbjct: 23  FRRGLRLHDNPSLREG 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,620
Number of Sequences: 336
Number of extensions: 2692
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)