Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0536
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 127 7e-32
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.78
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 24 1.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.5
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 7.3
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 9.6
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 9.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.6
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 9.6
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 127 bits (307), Expect = 7e-32
Identities = 55/81 (67%), Positives = 72/81 (88%)
Frame = +2
Query: 266 IFRNIVQKSADYDHESVVKIWIGPRLLVFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLG 445
+F +++K+ ++ + VVKIW+GP+L++ L DPRDVE+ILSS+VYIDK+ EYRFFKPWLG
Sbjct: 66 MFSQVLKKAENF--KDVVKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLG 123
Query: 446 NGLLISTGQKWRSHRKLIAPT 508
+GLLISTGQKWR+HRKLIAPT
Sbjct: 124 DGLLISTGQKWRNHRKLIAPT 144
Score = 50.4 bits (115), Expect = 1e-08
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 96 FSAINLFYVLLVPAVILWYAYWRMSRRRLYELADKLNXXXXXXXXXNALEFVG 254
FSA ++F LL+PA+IL++ Y+R+SRR L ELA+K+ NAL+ G
Sbjct: 9 FSASSVFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFG 61
Score = 48.4 bits (110), Expect = 6e-08
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 502 PHIHLNVLKSFIDLFNANSRAVVXKLKK 585
P HLNVLKSFIDLFNAN+R+VV K++K
Sbjct: 143 PTFHLNVLKSFIDLFNANARSVVEKMRK 170
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 24.6 bits (51), Expect = 0.78
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 471 KNGGLIVNLSPPHPSERF 524
+NG LI N+ PPH + F
Sbjct: 752 RNGALIYNILPPHVAAYF 769
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 282 FRKALTTITNPSLRSG*DLVSSSFCT-ILATW 374
FRK L NPSLR G S+ C +L W
Sbjct: 27 FRKGLRLHDNPSLREGLAGASTFRCVFVLDPW 58
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 96 FSAINLFYVLLVPAVILWYAYWRMSRRR 179
+S+++ FY+ + V L+Y ++ R R
Sbjct: 346 YSSLSSFYIPCIIMVFLYYNIFKALRNR 373
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.4 bits (43), Expect = 7.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 301 VVSAFLNYVSEDVSRSPTNSRAFPSNGSPG-GPFSLSASS 185
V +A +NY + S SPT S S S P + + SS
Sbjct: 48 VAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTSS 87
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 96 FSAINLFYVLLVPAVILWYAYWRMSRRRLYELA 194
+S++ F++ L+ +++ + +RRRL E A
Sbjct: 199 YSSLGSFFIPLLLMSLVYLEIYLATRRRLRERA 231
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 96 FSAINLFYVLLVPAVILWYAYWRMSRRRLYELA 194
+S++ F++ L+ +++ + +RRRL E A
Sbjct: 199 YSSLGSFFIPLLLMSLVYLEIYLATRRRLRERA 231
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 508 IHLNVLKSFIDLFNANSRAVVXK 576
+H+N +F+ L N N + + K
Sbjct: 52 VHVNFGLAFVQLINVNEKNQIMK 74
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 96 FSAINLFYVLLVPAVILWYAYWRMSRRRLYELA 194
+S++ F++ L+ +++ + +RRRL E A
Sbjct: 199 YSSLGSFFIPLLLMSLVYLEIYLATRRRLRERA 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,545
Number of Sequences: 438
Number of extensions: 3276
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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