Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0535
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.67 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.6  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   4.7  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   4.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 247 ICLLYMYIFCIIMYCLWY 194
           +C+ Y Y   II+ C++Y
Sbjct: 283 LCIYYFYCALIILLCIYY 300



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 247 ICLLYMYIFCIIMYCLWY 194
           +C  Y Y   II+ C++Y
Sbjct: 98  LCTYYFYYAFIILLCVYY 115


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +2

Query: 452 TSCEXARVGTXALPISAVKSNAFRFEGAGAARCNYTEILEFISQSGWRI 598
           +S   A++G    P+     N+ ++ G  A    Y EI+E   + GW++
Sbjct: 270 SSASNAKLGA---PVKGA-GNSGKYTGE-AGMLGYNEIVELQKEGGWKV 313


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 610 IYNVNAPPTLRYKF*DLGIVTTGCPRPFEPKRVTLH 503
           + ++ A    RYKF +   +  G   P  PKR+ +H
Sbjct: 22  LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIH 57


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 610 IYNVNAPPTLRYKF*DLGIVTTGCPRPFEPKRVTLH 503
           + ++ A    RYKF +   +  G   P  PKR+ +H
Sbjct: 22  LMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIH 57


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 154 KTVKYKNTAGMLRCTIDNTLLYKIYTYIINKYFY---YSYISNTFF 282
           K  + KNTA   +   ++  LY++   I N   Y    S+ +N +F
Sbjct: 131 KNARVKNTALWKQLRYEHYRLYQLSVLIDNNMSYIIIVSFATNLYF 176


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 224 ILYNNVLSMVHRNIPAVFLYFTVFSVN*TDVWKRSLLAI 108
           ILYN +L ++  +  + +LY  + + +   ++K + L I
Sbjct: 43  ILYNIILQVLFVSFVSYWLYLVLEADDMLPIYKNTYLII 81


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 224 ILYNNVLSMVHRNIPAVFLYFTVFSVN*TDVWKRSLLAI 108
           ILYN +L ++  +  + +LY  + + +   ++K + L I
Sbjct: 61  ILYNIILQVLFVSFVSYWLYLVLEADDMLPIYKNTYLII 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,627
Number of Sequences: 336
Number of extensions: 2435
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)