Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0534
(440 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 93 2e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 93 2e-18
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 90 2e-17
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 89 4e-17
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 87 1e-16
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 87 2e-16
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 86 3e-16
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 86 3e-16
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 84 1e-15
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 82 4e-15
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 79 4e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 78 7e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 77 2e-13
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 75 5e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 75 5e-13
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 75 7e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 75 7e-13
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 74 1e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 74 2e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 74 2e-12
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 73 2e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 72 5e-12
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 72 6e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 71 8e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 71 1e-11
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 70 2e-11
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 70 2e-11
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 70 2e-11
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 69 3e-11
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 67 2e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 65 6e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 64 1e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 64 1e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 1e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 1e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 64 1e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 62 5e-09
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 62 5e-09
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 62 5e-09
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 61 1e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 60 2e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 60 2e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 60 3e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 59 5e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 59 5e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 58 6e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 8e-08
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 58 1e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 56 3e-07
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 56 3e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 56 3e-07
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 56 3e-07
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 56 3e-07
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 56 3e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 56 4e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 56 4e-07
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 55 6e-07
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 55 6e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 55 6e-07
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 55 6e-07
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 55 6e-07
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 55 8e-07
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 54 1e-06
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 54 1e-06
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 54 1e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 53 3e-06
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 53 3e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 53 3e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 52 4e-06
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 52 4e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 5e-06
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 51 1e-05
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 51 1e-05
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 51 1e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 50 2e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 50 2e-05
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 50 2e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 49 5e-05
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 48 7e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 48 7e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 48 7e-05
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 48 9e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 48 1e-04
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 46 3e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 46 4e-04
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 46 5e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 45 8e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 44 0.001
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 40 0.018
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 40 0.024
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.024
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 40 0.031
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.17
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 37 0.22
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 37 0.22
UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1; Methylo... 36 0.51
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 35 0.89
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 2.7
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 3.6
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 32 4.7
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 32 6.3
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 31 8.3
UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI130... 31 8.3
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 93.1 bits (221), Expect = 2e-18
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +2
Query: 248 FLTCWRRRPNFISTFIXXFWTS*SLYFNFTRIWYNFSYYFTRERKKRNFWLFRNNLCYTS 427
F + W F+STFI FWT SLYFNFT IWYNFSYYF + KK N W+F +NLCY S
Sbjct: 13 FWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYIS 72
Query: 428 DWVI 439
+W+I
Sbjct: 73 NWII 76
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 93.1 bits (221), Expect = 2e-18
Identities = 51/84 (60%), Positives = 53/84 (63%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 135 HGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLL 194
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRNLNTSFFD
Sbjct: 195 SLPVLAGAITMLLTDRNLNTSFFD 218
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEV 320
++ L F PAGGGDPILYQHL FGHP++
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 90.2 bits (214), Expect = 2e-17
Identities = 49/84 (58%), Positives = 52/84 (61%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 111 HGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLL 170
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRNLNTSFFD
Sbjct: 171 SLPVLAGAITMLLTDRNLNTSFFD 194
Score = 56.0 bits (129), Expect = 3e-07
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILI 332
++ L F PAGGGDPILYQHL FGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 89.0 bits (211), Expect = 4e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F P+GGGDPILYQHL FGHPEVYILILPGFGIISH+I E GKK TFG
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFG 253
Score = 70.5 bits (165), Expect = 1e-11
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG SS + D++ LF +V ITA
Sbjct: 122 HGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLL 181
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN+NTSFFD
Sbjct: 182 SLPVLAGAITMLLTDRNMNTSFFD 205
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 87.4 bits (207), Expect = 1e-16
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTF 395
++ L F PAGGGDPILYQHL FGHPEVYILILPGFGIISH+++ GKK F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPF 268
Query: 396 G 398
G
Sbjct: 269 G 269
Score = 70.5 bits (165), Expect = 1e-11
Identities = 41/84 (48%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 138 HAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFD 221
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 86.6 bits (205), Expect = 2e-16
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTF 395
++ L F PAGGGDPILYQHL FGHPEVYILILPGFG+ISHI++ GKK F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPF 268
Query: 396 G 398
G
Sbjct: 269 G 269
Score = 68.5 bits (160), Expect = 6e-11
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 138 HPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFD 221
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 86.2 bits (204), Expect = 3e-16
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTF 395
++ L F PAGGGDPILYQHL FGHPEVYILILPGFG+ISH+++ GKK F
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Query: 396 G 398
G
Sbjct: 270 G 270
Score = 71.7 bits (168), Expect = 6e-12
Identities = 43/84 (51%), Positives = 46/84 (54%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 139 HAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 199 SLPVLAAGITMLLTDRNLNTTFFD 222
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 86.2 bits (204), Expect = 3e-16
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTF 395
++ L F PAGGGDPILYQHL FGHPEVYILILPGFG+ISH+++ GKK F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 268
Query: 396 G 398
G
Sbjct: 269 G 269
Score = 68.1 bits (159), Expect = 8e-11
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 138 HAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFD 221
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 83.8 bits (198), Expect = 1e-15
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = +3
Query: 186 TTCFSWSYYNIINRSKLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
++ SW N S F PAGGGD IL+QHL FGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 366 SXERGKKGTFG 398
+ GK+ FG
Sbjct: 236 AHYSGKREPFG 246
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 82.2 bits (194), Expect = 4e-15
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGK 383
F PAGGGDPILYQHL FGHPEVYILILPGFGIISHI+S GK
Sbjct: 223 FDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGK 267
Score = 74.9 bits (176), Expect = 7e-13
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G +VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 141 HSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLL 200
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NT+FFD
Sbjct: 201 SLPVLAGAITMLLTDRNFNTTFFD 224
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 79.0 bits (186), Expect = 4e-14
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGK 383
PAGGGDPILYQHL FGHPEVYILI+PGFG++SHI+S GK
Sbjct: 222 PAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGK 264
Score = 75.4 bits (177), Expect = 5e-13
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 138 HSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSF+D
Sbjct: 198 SLPVLAGAITMLLTDRNFNTSFYD 221
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 78.2 bits (184), Expect = 7e-14
Identities = 43/84 (51%), Positives = 52/84 (61%)
Frame = -1
Query: 254 SKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXX 75
SK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 14 SKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFT 73
Query: 74 XXXIDEIPAKCSEKIARSTDLPSC 3
I+E PAKC+EKI STD P+C
Sbjct: 74 APKIEETPAKCNEKIPMSTDAPAC 97
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 76.6 bits (180), Expect = 2e-13
Identities = 42/84 (50%), Positives = 49/84 (58%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
HEG SVDLAIFSLH+AG+ S + ++PLFV AV ITA
Sbjct: 57 HEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLL 116
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN+NTSFFD
Sbjct: 117 SLPVLAGAITMLLTDRNINTSFFD 140
Score = 38.7 bits (86), Expect = 0.055
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGH 311
F PAGGGDPILYQHL GH
Sbjct: 139 FDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 75.4 bits (177), Expect = 5e-13
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F P+GGGDPIL+QHL FGHPEVY+LILPGFGI+SHI +FG
Sbjct: 310 FEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFG 359
Score = 35.9 bits (79), Expect = 0.39
Identities = 28/82 (34%), Positives = 36/82 (43%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G VD +FSLHLAG+SS SF+ + V A T+
Sbjct: 235 GFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAYLFTSVLLLLSL 289
Query: 190 XXXAGAITILLTDRNLNTSFFD 255
A IT+LL DRN T+FF+
Sbjct: 290 PVLASGITMLLFDRNFGTAFFE 311
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 75.4 bits (177), Expect = 5e-13
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 138 HSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSF+D
Sbjct: 198 SLPVLAGAITMLLTDRNFNTSFYD 221
Score = 33.9 bits (74), Expect = 1.6
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 255 PAGGGDPILYQHL 293
PAGGGDPILYQHL
Sbjct: 222 PAGGGDPILYQHL 234
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 74.9 bits (176), Expect = 7e-13
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
+GGGDPILY+HL FGHPEVYILI+PGFGIISH++S KK FG
Sbjct: 224 SGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFG 269
Score = 65.3 bits (152), Expect = 6e-10
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 139 HSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ IT+LL DRN NTSFF++
Sbjct: 199 SLPVLSAGITMLLLDRNFNTSFFEV 223
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 74.9 bits (176), Expect = 7e-13
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F +GGGDPILYQHL FGHPEVYILILPGFG+ISHI+S +K FG
Sbjct: 228 FDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFG 276
Score = 72.9 bits (171), Expect = 3e-12
Identities = 39/84 (46%), Positives = 48/84 (57%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G +VDLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 146 HSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLL 205
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSFFD
Sbjct: 206 AVPVLAGAITMLLTDRNFNTSFFD 229
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 74.1 bits (174), Expect = 1e-12
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
P GGGDPIL+QHL FGHPEVYILILP FG+ISHI+ K FG
Sbjct: 225 PEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFG 272
Score = 41.5 bits (93), Expect = 0.008
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 EGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXX 183
+G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 141 DGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVT 200
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DR+ +TSF+
Sbjct: 201 SVPVLAAGLTLLLLDRHFSTSFY 223
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F PAGGGDPIL+QH+ FGHPEVYI+ILP FG+ISHI++ KK FG
Sbjct: 326 FDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFG 374
Score = 58.4 bits (135), Expect = 6e-08
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 13 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 192
R+VD AIF++H++G SS + ++PLF +V +TA+
Sbjct: 247 RAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLP 306
Query: 193 XXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN T+FFD
Sbjct: 307 VLAGAITMLLTDRNFGTTFFD 327
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
AGGGDPI YQH FGHPEVYILI+PGFGI+SHI+S KK FG
Sbjct: 224 AGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFG 269
Score = 68.1 bits (159), Expect = 8e-11
Identities = 38/85 (44%), Positives = 45/85 (52%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 139 HSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ IT+LL DRN NTSFF++
Sbjct: 199 SLPVLSAGITMLLMDRNFNTSFFEV 223
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 73.3 bits (172), Expect = 2e-12
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
P GGGD +LYQHL FGHPEVYILILPGFG++SHII+ KK FG
Sbjct: 226 PVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFG 272
Score = 64.1 bits (149), Expect = 1e-09
Identities = 36/84 (42%), Positives = 41/84 (48%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 142 HSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIV 201
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A AIT+LL DRN NTSF+D
Sbjct: 202 AIPVLAAAITLLLFDRNFNTSFYD 225
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 72.1 bits (169), Expect = 5e-12
Identities = 41/84 (48%), Positives = 46/84 (54%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 121 HAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLL 180
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSFFD
Sbjct: 181 SLPVLAGAITMLLTDRNFNTSFFD 204
Score = 34.7 bits (76), Expect = 0.89
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 249 F*PAGGGDPILYQHL 293
F PAGGGDPILYQHL
Sbjct: 203 FDPAGGGDPILYQHL 217
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 71.7 bits (168), Expect = 6e-12
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
AGGGDPILYQHL FGHPEVYILI+PGFGIIS IS K FG
Sbjct: 224 AGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFG 269
Score = 64.9 bits (151), Expect = 7e-10
Identities = 38/85 (44%), Positives = 44/85 (51%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 139 HSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
AG IT++LTDRN NTSFF++
Sbjct: 199 SLPVLAGGITMVLTDRNFNTSFFEV 223
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 71.3 bits (167), Expect = 8e-12
Identities = 43/84 (51%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 127 HAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLL 186
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 187 SLPVLAAGITMLLTDRNLNTTFFD 210
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 70.5 bits (165), Expect = 1e-11
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 139 HSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDR NT+FFD
Sbjct: 199 SLPVLAGAITMLLTDRYFNTTFFD 222
Score = 38.3 bits (85), Expect = 0.072
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFG 308
F PAGGGDPILYQHL FG
Sbjct: 221 FDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 70.1 bits (164), Expect = 2e-11
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
AGGGDP LYQHL FGHPEVYI+ILPGFGIIS I+S +K FG
Sbjct: 266 AGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFG 311
Score = 60.5 bits (140), Expect = 2e-08
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G +VD+AI SLH+AG SS + ++PLFV +V +TAF
Sbjct: 183 GPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLAL 242
Query: 190 XXXAGAITILLTDRNLNTSFFD 255
A AIT+LLTDRN T+F+D
Sbjct: 243 PVLAAAITMLLTDRNFGTTFYD 264
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 70.1 bits (164), Expect = 2e-11
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
AGGGD ILYQHL FGHPEVYILI+PGFGIIS +IS K FG
Sbjct: 250 AGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFG 295
Score = 61.7 bits (143), Expect = 7e-09
Identities = 37/85 (43%), Positives = 42/85 (49%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H VDL IF LHL+GISS +L LF AV ITA
Sbjct: 165 HSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLL 224
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
A AIT+LLTDRNLNTSF++L
Sbjct: 225 SLPVLAAAITMLLTDRNLNTSFYEL 249
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +3
Query: 243 IIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
+ F P GDPILYQHL FGHPEVYILILP FG+ISH+IS
Sbjct: 224 LFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 69.3 bits (162), Expect = 3e-11
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGK 383
AGGGDPIL+QHL FGHPEVYILI+PGFGIIS IS K
Sbjct: 249 AGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 46.0 bits (104), Expect = 4e-04
Identities = 31/85 (36%), Positives = 40/85 (47%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LHL+G+SS +L LF A +
Sbjct: 171 HSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL 230
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
IT++LTDRN NTSFF++
Sbjct: 231 -------GITMVLTDRNFNTSFFEV 248
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 66.9 bits (156), Expect = 2e-10
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +2
Query: 287 TFIXXFWTS*SLYFNFTRIWYNFSYYFTRERKKRNFWLFRNNLCYTSDW 433
+ + FW+S SLYFN IWYNF YY+T + K W F NNLCY S W
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYW 50
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 65.3 bits (152), Expect = 6e-10
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 139 HSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ IT+LL DRN NTSFF++
Sbjct: 199 SLPVLSAGITMLLLDRNFNTSFFEV 223
Score = 34.7 bits (76), Expect = 0.89
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILIL 335
+GGGDPILY+HL FG I++L
Sbjct: 224 SGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
+GGGDP+LY+H+ FGHPEVYILI+P FG++S I+ KK FG
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQV-YAKKPIFG 286
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
+GGGDP+LY+H+ FGHPEVYILI+P FG++S I+ KK FG
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQV-YAKKPIFG 286
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
Score = 33.1 bits (72), Expect = 2.7
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKK 386
+GGGDP+LY+H+ FG +++ +I+ II++ I + KK
Sbjct: 241 SGGGDPLLYEHIFWFFG--QIWPIIIIIIIIINYAICGKDFKK 281
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 64.1 bits (149), Expect = 1e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 243 IIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
+ F + GDP+LYQHL FGHPEVYI+ILPGFGIIS ++S
Sbjct: 224 MFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 62.1 bits (144), Expect = 5e-09
Identities = 34/85 (40%), Positives = 44/85 (51%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 139 HSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ +T+LL DRN NTSFF++
Sbjct: 199 TLPVLSAGVTMLLLDRNFNTSFFEV 223
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFG 308
AGGGDPILY+HL FG
Sbjct: 224 AGGGDPILYEHLFWFFG 240
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 62.1 bits (144), Expect = 5e-09
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +3
Query: 261 GGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
GGG P+L+QHL FGHPEVYI+ LP FGI+S +IS +K FG
Sbjct: 264 GGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFG 308
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 62.1 bits (144), Expect = 5e-09
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F P GGGDP++YQHL + HP VYI+ILP FG+IS +I +K FG
Sbjct: 231 FNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVIPV-HARKPIFG 279
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 60.9 bits (141), Expect = 1e-08
Identities = 34/76 (44%), Positives = 41/76 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 79 HAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVLLLL 138
Query: 184 XXXXXAGAITILLTDR 231
AGAIT+LLTDR
Sbjct: 139 SLPVLAGAITMLLTDR 154
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3
Query: 246 IF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
+F PA GGDP+L+QHL + HP VYI++LP FG++S +++ +K FG
Sbjct: 245 MFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFG 294
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +3
Query: 261 GGGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
GGGDPIL+QHL FGHPEVYI+ILP +GI+ ++S
Sbjct: 262 GGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 59.7 bits (138), Expect = 3e-08
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
GG+P+LYQHL FGHPEVY++ILP FGIIS + K FG
Sbjct: 235 GGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFG 279
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +1
Query: 16 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 195
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 152 SLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPV 211
Query: 196 XAGAITILLTDRNLNTSFFD 255
AG++ LL DRN NTSF+D
Sbjct: 212 LAGSLLFLLLDRNFNTSFYD 231
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 58.8 bits (136), Expect = 5e-08
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
P GGG +L+QHL FGHPEVYI ILP GI+SHI+
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 58.8 bits (136), Expect = 5e-08
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F P GG +L+QH FGHPEVYILILPGFG+IS +I
Sbjct: 239 FDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 58.4 bits (135), Expect = 6e-08
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKK 386
F GGDPI +QHL FGHPEVY+L+LP GI+S I+ G+K
Sbjct: 274 FFTVAGGDPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK 319
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.0 bits (134), Expect = 8e-08
Identities = 32/84 (38%), Positives = 41/84 (48%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G +VDLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 144 HSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLL 203
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A +T+ + DRN NTSFF+
Sbjct: 204 SLPVLAAGLTMGIFDRNFNTSFFE 227
Score = 39.1 bits (87), Expect = 0.041
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILIL 335
AGGGD +LYQHL + HPEV I+ L
Sbjct: 229 AGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 57.6 bits (133), Expect = 1e-07
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
PA GDP L+QH+ FGHPEVYIL+LP G++S +I
Sbjct: 232 PAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI 268
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F P GGD +L+QHL FGHPEVYILILP GIIS ++
Sbjct: 238 FLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 56.4 bits (130), Expect = 3e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
GGDP+LYQHL FGHPEVY++ILP FG+ S I
Sbjct: 209 GGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 37.9 bits (84), Expect = 0.096
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 16 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 195
SV+ ++FSLHLAGI+S + L LF ++ + +
Sbjct: 128 SVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPV 185
Query: 196 XAGAITILLTDRNLNTSFFD 255
A IT++LTD++L T F+D
Sbjct: 186 LAVGITLILTDKHLGTCFYD 205
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 56.4 bits (130), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3
Query: 303 FGHPEVYILILPGFGIISHIISXERGKKGTFG 398
FGHPEVYILILPGFG+ISHI++ GKK FG
Sbjct: 3 FGHPEVYILILPGFGMISHIVAYYSGKKEPFG 34
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 56.4 bits (130), Expect = 3e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +3
Query: 261 GGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
GGGD IL+QH+ FGHPEVYI++LP FG+IS I+
Sbjct: 227 GGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
Score = 52.8 bits (121), Expect = 3e-06
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H + D +F++HL GISS SF LF+ A ITA
Sbjct: 141 HSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLII 200
Query: 184 XXXXXAGAITILLTDRNLNTSFFDLL 261
AG +T++L DRN NTSF+D++
Sbjct: 201 TLPVLAGGVTLILCDRNFNTSFYDVV 226
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 56.0 bits (129), Expect = 3e-07
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
F PA GGD +L+QHL FGHPEVYI+ LP G++S I++
Sbjct: 236 FNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 56.0 bits (129), Expect = 3e-07
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
A GGDPIL QHL FGHPEVY+LI+P FG I+ I+
Sbjct: 384 AYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIV 419
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 55.6 bits (128), Expect = 4e-07
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F P GGGDP+L+QH + HP VY+L+LP FGI S + +K FG
Sbjct: 246 FRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELFPV-YARKPLFG 294
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 55.6 bits (128), Expect = 4e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 267 GDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
GDP+LYQHL FGHPEVY++ILP FG+ S I++
Sbjct: 236 GDPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 36.3 bits (80), Expect = 0.29
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G ++DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 152 GVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSL 211
Query: 190 XXXAGAITILLTDRNLNTSFFDLL 261
AIT LL DRN+N++ +D++
Sbjct: 212 PILGVAITGLLLDRNINSTIYDVI 235
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
GG + YQHL FGHPEVYILILP GIIS +I +K FG
Sbjct: 245 GGSVVFYQHLFWTFGHPEVYILILPAMGIISEVIPV-HARKMLFG 288
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 55.2 bits (127), Expect = 6e-07
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F A GDPIL+QHL FGHPEVYI+ +P G++S II
Sbjct: 242 FFTAASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 55.2 bits (127), Expect = 6e-07
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 246 IF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
IF PA GGDP+L+QH + HP VYI++LP +IS ++ +K FG
Sbjct: 238 IFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV-CAFSRKNIFG 287
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 55.2 bits (127), Expect = 6e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKK 386
AG G IL+QHL FGHPEVYI++LP GIIS+I+ G++
Sbjct: 308 AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR 350
Score = 33.5 bits (73), Expect = 2.1
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 19 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 198
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLL 289
Query: 199 AGAITILLTDRNLNTSFF 252
AI +LL DRN TSFF
Sbjct: 290 GSAIMMLLFDRNFGTSFF 307
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 55.2 bits (127), Expect = 6e-07
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F P GG+ ++++HL FGHPEVYILILP FGI S +I
Sbjct: 229 FNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 54.8 bits (126), Expect = 8e-07
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 234 LKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKK 386
L + IF GG+P++Y +L +GHPEVYILILP FG+ S + S GK+
Sbjct: 259 LDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR 309
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 54.4 bits (125), Expect = 1e-06
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
GGDP+L+QHL FGHPEVYI+ LP G++S I+
Sbjct: 251 GGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 54.0 bits (124), Expect = 1e-06
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
GGDP+L+QHL FGHPEVYI+ LP G++S I+
Sbjct: 310 GGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 54.0 bits (124), Expect = 1e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +3
Query: 231 KLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
KL ++ PA GG +L+QHL FGHPEVY+L LP FGI+S II
Sbjct: 240 KLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 52.8 bits (121), Expect = 3e-06
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
AGGG P+L+QHL + HP VYI+ILP G++S I++ +K FG
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFG 317
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 52.8 bits (121), Expect = 3e-06
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
GG P+L+QHL GHPEVYI+++P GI S +I+ +K FG
Sbjct: 287 GGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFG 330
Score = 31.9 bits (69), Expect = 6.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 121 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 252
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 229 SFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFF 272
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F A GG P+L+Q L FGHPEVYILILP G++S ++ + ++ FG
Sbjct: 218 FDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFG 266
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 52.4 bits (120), Expect = 4e-06
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKK 386
GG+ ++Y +L +GHPEVYIL+LP FGI S ++S GK+
Sbjct: 270 GGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR 310
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 52.4 bits (120), Expect = 4e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGK 383
GGDP+L+QHL FGHPEVYI+ LP G+++ ++ GK
Sbjct: 267 GGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 52.0 bits (119), Expect = 5e-06
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F A GGD +L+QHL FGHPEVYI+ LP G IS I+
Sbjct: 236 FQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
A GGD +L+QHL FGHPEVYI+ LP G IS I+
Sbjct: 239 AEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F P GGDP+L+QHL FGHPEVYI+ LP + + I+
Sbjct: 262 FDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
GG P+L+ +L +GHPEVYI+ILP FGI S IIS +K FG
Sbjct: 265 GGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFG 308
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 264 GGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 315 EVYILILPGFGIISHIISXERGKKGTFG 398
EVYILILPGFG+ISHIIS E GKK FG
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFG 182
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 50.0 bits (114), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F PA GGDP++YQ++ + HP VY+ +LP FG S II
Sbjct: 176 FNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.8 bits (111), Expect = 5e-05
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3
Query: 147 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*PA 260
M C +YS +TC WSYYN IN SKLKYI+F P+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPS 121
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 48.4 bits (110), Expect = 7e-05
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +3
Query: 261 GGGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
GGG P+L+QHL + HP VYI++LP G++S ++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 48.4 bits (110), Expect = 7e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
F PA GGDP+L+Q + HP VY+++LP GI++ + S +K FG
Sbjct: 230 FNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFG 278
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 48.4 bits (110), Expect = 7e-05
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGK 383
PAGG +L+ HL FGHPEVYIL+ P G ++ +IS GK
Sbjct: 232 PAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 48.0 bits (109), Expect = 9e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGK 383
GG+ + + ++ FGHPEVYILILP FG+ S I S GK
Sbjct: 289 GGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGK 328
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
F PA GGDPI Y HL HPEVY+L++P G++ ++
Sbjct: 222 FNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 46.4 bits (105), Expect = 3e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +3
Query: 258 AGGGDPILYQHLXXXFGHPEVYILILPGFGIIS 356
A GG P+L+QHL F HP VY+++LP GI+S
Sbjct: 259 AHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 46.0 bits (104), Expect = 4e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 264 GGDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
GG+ +LY +L +GHPEVY ++LP FG IS II
Sbjct: 288 GGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 45.6 bits (103), Expect = 5e-04
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 138 HSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLL 197
Query: 184 XXXXXAG 204
AG
Sbjct: 198 SLPVLAG 204
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 44.8 bits (101), Expect = 8e-04
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +3
Query: 231 KLKYIIF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
KL +F P GG P+LYQ + HP VY+++LP GI + + S +K FG
Sbjct: 232 KLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFG 286
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3
Query: 303 FGHPEVYILILPGFGIISHIISXERGKKGTFG 398
FGHPEVY+LILP FGI+SHI FG
Sbjct: 2 FGHPEVYVLILPVFGIVSHICMTFTNNDSLFG 33
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 40.3 bits (90), Expect = 0.018
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +3
Query: 144 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*PAGGGDP 275
CM C +Y TCFS S+Y IIN K KY IF P P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.9 bits (89), Expect = 0.024
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 237 KYI---IF*PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
KYI F A GGD + YQ+L + HP VY++ LP ++ I++
Sbjct: 213 KYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 39.9 bits (89), Expect = 0.024
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 267 GDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKK 386
G +L+ HL FGHPEVYI+ P G+++ G++
Sbjct: 248 GASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 39.5 bits (88), Expect = 0.031
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 267 GDPILYQHLXXXFGHPEVYILILPGFGIISHIIS 368
G +++++L FGHPEVY+L+LPG G + +S
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.17
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 190 XXXAGAITILLTDRNLNT 243
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 36.7 bits (81), Expect = 0.22
Identities = 30/83 (36%), Positives = 34/83 (40%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H +VDL IF LHLAGISS ++ LF
Sbjct: 128 HSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLIL 187
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A AIT+L R N SFF
Sbjct: 188 SXPVLAAAITMLXXXRXXNXSFF 210
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 36.7 bits (81), Expect = 0.22
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 127 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDLLEEE 270
DQ+ LF ++ IT AG IT+LL+DRN N FF L+ E
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGE 59
>UniRef50_Q60AP6 Cluster: Putative membrane protein; n=1;
Methylococcus capsulatus|Rep: Putative membrane protein
- Methylococcus capsulatus
Length = 263
Score = 35.5 bits (78), Expect = 0.51
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +3
Query: 255 PAGGGDPILYQHLXXXFGHPEVYILILPGFGIISHIISXERGKKGTFG 398
PA GG P + HL G Y LI GFG+I I S +G G
Sbjct: 39 PASGGRPTPFSHLLYGTGKTLSYTLIGAGFGLIGSIFSFSPILRGAIG 86
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 34.7 bits (76), Expect = 0.89
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISS 63
H G SVD AIFSLHLAG SS
Sbjct: 33 HGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 2.7
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISS 63
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 3.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 230 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 108
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 32.3 bits (70), Expect = 4.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 312 PEVYILILPGFGIISHIISXERGKK 386
PE+Y LILPG G++ I ++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 31.9 bits (69), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 267 GDPILYQHLXXXFGHPEVYILILPGFGIISHII 365
G P+ Y HPEVY+ ILP F I I+
Sbjct: 319 GHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 287 TFIXXFWTS*SLYFNFTRIWYNFSYYFTRERKKRNFWLFRNNLCYTSDW 433
T I W S+Y F IW +F+ T FW+ N L + S+W
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNW 49
>UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI1305w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI1305w - Plasmodium falciparum
(isolate 3D7)
Length = 1327
Score = 31.5 bits (68), Expect = 8.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 332 FTRIWYNFSYYFTRERKKRNFWLFRNNLCYTSDW 433
F IW ++ + KK +W N++ YTS W
Sbjct: 1045 FNIIWIKIKTWYKKIDKKEKYWKRYNDILYTSQW 1078
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,226,486
Number of Sequences: 1657284
Number of extensions: 4505840
Number of successful extensions: 13418
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 11597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13178
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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