Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0533
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.1  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 194 YFLGQAA*IVQFSILFLNIIHVYIIVYNTLYYTNI 90
           YF G+ +    FS++  NI+   ++ + TL +T I
Sbjct: 192 YFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFI 226


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 194 YFLGQAA*IVQFSILFLNIIHVYIIVYNTLYYTNI 90
           YF G+ +    FS++  NI+   ++ + TL +T I
Sbjct: 192 YFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFI 226


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 194 YFLGQAA*IVQFSILFLNIIHVYIIVYNTLYYTNI 90
           YF G+ +    FS++  NI+   ++ + TL +T I
Sbjct: 192 YFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFI 226


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  SYSIKCYTQLCIHELYLKIIC 157
           S +I    QL I +LYL I+C
Sbjct: 196 SINIISLVQLWIFQLYLLILC 216


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +3

Query: 21  IYYFNCMLDFYYFVIAIYIKWRQNIRIV*SVIHNYVYMNYI*K*YAKLYNLRSLTQKIFS 200
           +Y FN       FV+++       I ++ S +H   + N++    A    L  L Q I  
Sbjct: 72  LYSFNTFAKLLIFVVSLSGNSAVFIMLIISFMHKKSFKNFVNNVAALDETLAKLGQYINY 131

Query: 201 DLFGTLCL*RTM 236
           +    +CL  T+
Sbjct: 132 ETDYYVCLAMTI 143


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +2

Query: 422 HVLYIVMTAILKSIYTFLN-----FVNSALYWSAYFV 517
           H ++IV++    S Y   N      V    +WSA+F+
Sbjct: 244 HFIFIVVSIFYMSAYLISNPIMWDRVMLLTFWSAFFI 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,890
Number of Sequences: 336
Number of extensions: 3795
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)