Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0532
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75543-13|CAI79192.1|  281|Caenorhabditis elegans Hypothetical p...    31   0.88 
Z75543-12|CAA99874.4|  280|Caenorhabditis elegans Hypothetical p...    31   0.88 
AY728061-1|AAU43722.1|  281|Caenorhabditis elegans cadmium-induc...    31   0.88 
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    29   3.5  

>Z75543-13|CAI79192.1|  281|Caenorhabditis elegans Hypothetical
           protein K01D12.13b protein.
          Length = 281

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 453 SALLLYILYKFGKFHTPPSRNFRKKEYK 536
           SA  +Y +YK  KF TPP+ N + K +K
Sbjct: 13  SAAAIYAVYKINKFFTPPTINPKPKIHK 40


>Z75543-12|CAA99874.4|  280|Caenorhabditis elegans Hypothetical
           protein K01D12.13a protein.
          Length = 280

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 453 SALLLYILYKFGKFHTPPSRNFRKKEYK 536
           SA  +Y +YK  KF TPP+ N + K +K
Sbjct: 13  SAAAIYAVYKINKFFTPPTINPKPKIHK 40


>AY728061-1|AAU43722.1|  281|Caenorhabditis elegans
           cadmium-inducible lysosomal proteinCDR-7 protein.
          Length = 281

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 453 SALLLYILYKFGKFHTPPSRNFRKKEYK 536
           SA  +Y +YK  KF TPP+ N + K +K
Sbjct: 13  SAAAIYAVYKINKFFTPPTINPKPKIHK 40


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 3   APGYRRP*TSTMPGAELSRCLPLNTLHKP 89
           +PG R P  S +PG E    +P N  H P
Sbjct: 126 SPGRRSPPRSRLPGPERRDVMPFNPRHSP 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,586,742
Number of Sequences: 27780
Number of extensions: 237301
Number of successful extensions: 428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)