Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0531
(613 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 172 6e-42
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 167 2e-40
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 163 3e-39
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 152 6e-36
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 128 8e-29
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 120 2e-26
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 117 2e-25
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 116 4e-25
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 102 6e-21
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 99 1e-19
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 96 7e-19
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 87 2e-16
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 78 2e-13
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 72 9e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 61 2e-08
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 60 4e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 59 9e-08
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 57 4e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 7e-07
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 3e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 47 4e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 46 7e-04
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 44 0.003
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 42 0.012
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.43
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 34 2.3
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 3.1
UniRef50_Q4MQU2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_Q89HY9 Cluster: Bll5850 protein; n=3; Bradyrhizobium|Re... 33 7.1
UniRef50_Q5D8M9 Cluster: SJCHGC09118 protein; n=1; Schistosoma j... 33 7.1
UniRef50_A0ZED1 Cluster: Death on curing protein-like protein; n... 32 9.3
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 172 bits (418), Expect = 6e-42
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+T
Sbjct: 2 GFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDIT 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AYSRIEGD I+CAAYSHELPR
Sbjct: 62 CQIAYSRIEGDKILCAAYSHELPR 85
Score = 115 bits (277), Expect = 8e-25
Identities = 51/61 (83%), Positives = 55/61 (90%)
Frame = +1
Query: 382 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDA+ K
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 562 S 564
+
Sbjct: 158 T 158
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 167 bits (405), Expect = 2e-40
Identities = 74/84 (88%), Positives = 80/84 (95%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T
Sbjct: 2 GFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDIT 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
Q+AY+RIEGD +VCAAYSHELP+
Sbjct: 62 VQIAYARIEGDRVVCAAYSHELPK 85
Score = 142 bits (345), Expect = 4e-33
Identities = 66/104 (63%), Positives = 75/104 (72%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+G++VGLTNYAAAY TG E+NVEPVD+GPGAFRC+
Sbjct: 86 YGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCF 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPKS 564
LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFPGY A+ KS
Sbjct: 146 LDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKS 189
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 163 bits (396), Expect = 3e-39
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
Score = 128 bits (308), Expect = 1e-28
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 152 bits (369), Expect = 6e-36
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
G VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 2 GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVV 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
Q+AYS+IEGD +V +AYSHELPR
Sbjct: 62 AQLAYSKIEGDVVVASAYSHELPR 85
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPGAFRC 429
+G+KVGLTNYAAAY+TG +YNVE D P F+
Sbjct: 86 YGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKA 143
Query: 430 YLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD+GLARTTTG+++F MKG DGG+NVPHS RF G+D + K
Sbjct: 144 VLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESK 187
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 128 bits (310), Expect = 8e-29
Identities = 53/82 (64%), Positives = 72/82 (87%)
Frame = +2
Query: 5 FVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 184
FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 26 FVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIA 85
Query: 185 QVAYSRIEGDHIVCAAYSHELP 250
Q+ ++I GD +V AAY+HELP
Sbjct: 86 QIVQAKIVGDEVVMAAYAHELP 107
Score = 84.6 bits (200), Expect = 2e-15
Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG----- 417
FG++ GLTNYAAAY+TG V + G
Sbjct: 109 FGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEER 168
Query: 418 -AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPKSSM 570
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ + KSS+
Sbjct: 169 FPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKE-KSSL 219
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 120 bits (290), Expect = 2e-26
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +2
Query: 5 FVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 184
FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N + C
Sbjct: 3 FVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIIC 62
Query: 185 QVAYSRIEGDHIVCAAYSHELPR 253
QV Y+ ++GD +V AA S EL R
Sbjct: 63 QVIYATLKGDKVVAAAESTELKR 85
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/101 (39%), Positives = 54/101 (53%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
FG+ GLTNYAAAY+TG + N++ P F
Sbjct: 86 FGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAV 140
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAD 555
LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ D
Sbjct: 141 LDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVD 181
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 117 bits (282), Expect = 2e-25
Identities = 55/83 (66%), Positives = 64/83 (77%)
Frame = +2
Query: 5 FVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 184
+VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N + C
Sbjct: 3 YVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIIC 62
Query: 185 QVAYSRIEGDHIVCAAYSHELPR 253
Q+A S IEGD I+ A S EL R
Sbjct: 63 QIASSHIEGDKILSEAKSKELIR 85
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG---AF 423
+G+ VGL NYAAAY+TG + G
Sbjct: 86 YGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKPI 145
Query: 424 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 543
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG 185
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 116 bits (279), Expect = 4e-25
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = +2
Query: 14 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 187
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 188 VAYSRIEGDHIVCAAYSHELPR 253
V Y+ + GD +CAAYSHELP+
Sbjct: 73 VVYATLSGDVTICAAYSHELPK 94
Score = 102 bits (245), Expect = 6e-21
Identities = 49/104 (47%), Positives = 61/104 (58%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+G+K GLTNYAA Y+TG +Y+VE D F+C+
Sbjct: 95 YGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCF 154
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPKS 564
LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GYD KS
Sbjct: 155 LDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGYDLQDKS 198
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 102 bits (245), Expect = 6e-21
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +2
Query: 5 FVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 184
FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T
Sbjct: 14 FVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITA 73
Query: 185 QVAYSRIEGD 214
Q+ + I GD
Sbjct: 74 QIISASIAGD 83
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/105 (47%), Positives = 60/105 (57%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG Y+VE +N F+
Sbjct: 35 YGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEENERRPFKAL 94
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPKSS 567
LDVG+ TTG RVFGA+KGA DGGL+VPHS KRFPGY D +++
Sbjct: 95 LDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDEENN 139
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 95.9 bits (228), Expect = 7e-19
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +2
Query: 11 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 190
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 191 AYSRIEGDHIVCAAYSHELPR 253
+ + GD VC A S ELP+
Sbjct: 64 VVAELTGDKTVCQALSTELPK 84
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/103 (41%), Positives = 57/103 (55%)
Frame = +1
Query: 226 RCLFT*VATFGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 405
+ L T + +G+K+GL+NY AAY+TG EY + +
Sbjct: 76 QALSTELPKYGIKLGLSNYPAAYATGLLVARRFLTQMKLADVFKTEITE---EYLNDEEN 132
Query: 406 NGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 534
P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 133 RRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 87.4 bits (207), Expect = 2e-16
Identities = 35/68 (51%), Positives = 52/68 (76%)
Frame = +2
Query: 50 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 229
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 230 AYSHELPR 253
A S+EL R
Sbjct: 367 ADSYELKR 374
Score = 87.0 bits (206), Expect = 3e-16
Identities = 43/98 (43%), Positives = 51/98 (52%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
FGV GL +YAAAY+TG +NV+ F+
Sbjct: 375 FGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAI 434
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 546
LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY
Sbjct: 435 LDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGY 472
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYY 91
GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 14 GFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPGAFRC 429
+G+ G TNY+AAY+TG Y+V + +D A R
Sbjct: 80 YGINFGATNYSAAYATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRV 137
Query: 430 YLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAD 555
+LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+ D
Sbjct: 138 FLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGHKPD 179
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +2
Query: 26 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 205
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 206 EGDHIVCAAYSHELPR 253
+GD ++ A S EL R
Sbjct: 64 DGDRVMVYADSRELER 79
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 72.1 bits (169), Expect = 9e-12
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +2
Query: 23 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 202
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 203 IEGDHIVCAAYSHELPRL 256
++GD I+ ++Y L +L
Sbjct: 69 VDGDFILLSSYLKNLSKL 86
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +1
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 534
+D+GL R T G + F +MKG+VD G+N+PH+ +
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNK 165
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +2
Query: 41 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 220
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 221 VCAAYSHEL 247
+ AA+S EL
Sbjct: 59 IAAAHSREL 67
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 415 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 543
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 442 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ K
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSK 110
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 149 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 253
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPK 35
Score = 32.3 bits (70), Expect = 9.3
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 256 GVKVGLTNYAAAYSTG 303
GVKVGLTNYAAAY G
Sbjct: 37 GVKVGLTNYAAAYCIG 52
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 58.8 bits (136), Expect = 9e-08
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +1
Query: 382 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G D K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +2
Query: 41 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 220
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 221 VCAAYSHEL 247
+ AAYS EL
Sbjct: 59 LVAAYSAEL 67
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 540
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 7e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +2
Query: 47 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 142
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 415 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 540
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 40.7 bits (91), Expect = 0.027
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 38 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 217
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 218 IV 223
++
Sbjct: 58 VI 59
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +2
Query: 41 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 220
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 221 VCAAYSHEL 247
+ +A+S +L
Sbjct: 59 LASAHSSDL 67
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 415 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 525
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 46.0 bits (104), Expect = 7e-04
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +2
Query: 41 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 220
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 221 VCAAYSHELPR 253
+A S EL +
Sbjct: 59 YSSAVSSELAK 69
Score = 41.1 bits (92), Expect = 0.020
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 540
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 44 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 223
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 224 CAAYSHEL 247
+A S L
Sbjct: 60 VSATSKNL 67
Score = 37.1 bits (82), Expect = 0.33
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 540
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 41.9 bits (94), Expect = 0.012
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2
Query: 5 FVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNKDV 178
+ K++KN YF ++ VK +R R+ T Y R + NK + K+R +N ++
Sbjct: 3 YQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNTNL 60
Query: 179 TCQVAYSRIEGDHIVCAAYSHEL 247
+ + +S + GD IV A S +L
Sbjct: 61 SGVITFSSLSGDTIVAKASSMDL 83
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.43
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 59 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 238
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 239 HELPR 253
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.3 bits (75), Expect = 2.3
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +2
Query: 5 FVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 184
F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+ C
Sbjct: 104 FQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDLQC 162
Query: 185 QVA 193
+A
Sbjct: 163 SLA 165
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 415 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 540
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
Score = 32.3 bits (70), Expect = 9.3
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 56 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIV 223
FKR+ G TDY R +L ++ + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKL-LKSREK------RFIVRITGKGVIAQVAEYSDI-GDRIL 54
>UniRef50_Q4MQU2 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus G9241|Rep: Putative uncharacterized
protein - Bacillus cereus G9241
Length = 417
Score = 33.5 bits (73), Expect = 4.0
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = -1
Query: 322 VFVLIADQLNMLQHNLSDQPSHQTWQLM*ISSAHNMVTFNPRVGHLACYIFVGETHNQTI 143
+ + IA ++N+ +N+++ +H + S+HN+ + F + NQ
Sbjct: 192 ITIPIAMKVNLNNYNVTEPVNHNQNYINYSFSSHNLTNLREMMNLFTISDFRARSSNQVR 251
Query: 142 FRCVIFVLVLNNEAFTSII 86
VIF L+ E+FTSII
Sbjct: 252 SGDVIFNRSLSEESFTSII 270
>UniRef50_Q89HY9 Cluster: Bll5850 protein; n=3; Bradyrhizobium|Rep:
Bll5850 protein - Bradyrhizobium japonicum
Length = 570
Score = 32.7 bits (71), Expect = 7.1
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +1
Query: 409 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPKSSMLKYTGL 588
G R YLD G TG++ FG A G L VP + R G + Y G
Sbjct: 305 GRRRLRAYLDRGYMVLMTGSKFFGG--PAFSGALLVPKGLSRSLGRIGEIAPGFFDYAGR 362
Query: 589 TSW 597
+ W
Sbjct: 363 SDW 365
>UniRef50_Q5D8M9 Cluster: SJCHGC09118 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09118 protein - Schistosoma
japonicum (Blood fluke)
Length = 299
Score = 32.7 bits (71), Expect = 7.1
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 165 PTKM*HARWPTLGL--KVTILCALLIHMSCHVWCEGW 269
P + H RWP LG VT+L ++++ WC W
Sbjct: 110 PPRRPHRRWPFLGFLRLVTLLLMQALYLAWFAWCSAW 146
>UniRef50_A0ZED1 Cluster: Death on curing protein-like protein; n=1;
Nodularia spumigena CCY 9414|Rep: Death on curing
protein-like protein - Nodularia spumigena CCY 9414
Length = 130
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = -1
Query: 316 VLIADQLNMLQHNLSDQPSHQTWQL-----M*ISSAHNMVTFNPRVGHLACYIFVG 164
VL+A L LQH S Q W+L + H+ V N R +A Y+F+G
Sbjct: 33 VLLAASLARLQHKFSVQSEVSLWELAAAYGFALCQNHSFVDGNKRTAFMAMYVFLG 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,890,144
Number of Sequences: 1657284
Number of extensions: 12252175
Number of successful extensions: 30938
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 29779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30908
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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