Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0531
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 163 4e-40
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 163 4e-40
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 163 4e-40
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 163 4e-40
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 163 4e-40
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 163 4e-40
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 163 4e-40
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 161 2e-39
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 107 4e-23
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 66 7e-11
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 178 KRFPGYDSESKEFNAEVHRKHIM 200
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 178 KRFPGYDSESKEFNAEVHRKHIM 200
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 178 KRFPGYDSESKEFNAEVHRKHIM 200
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 178 KRFPGYDSESKEFNAEVHRKHIM 200
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 62 CQIAYARIEGDMIVCAAYAHELPK 85
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 178 KRFPGYDSESKEFNAEVHRKHIM 200
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 163 bits (396), Expect = 4e-40
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 9 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 68
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 69 CQIAYARIEGDMIVCAAYAHELPK 92
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 93 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 152
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 153 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 195
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 185 KRFPGYDSESKEFNAEVHRKHIM 207
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 161 bits (391), Expect = 2e-39
Identities = 69/84 (82%), Positives = 80/84 (95%)
Frame = +2
Query: 2 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 181
GFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDII 61
Query: 182 CQVAYSRIEGDHIVCAAYSHELPR 253
CQ+AY+RIEGD IVCA Y+HELP+
Sbjct: 62 CQIAYARIEGDMIVCARYAHELPK 85
Score = 128 bits (308), Expect = 2e-29
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 86 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 145
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
LD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 146 LDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 178 KRFPGYDSESKEFNAEVHRKHIM 200
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 107 bits (256), Expect = 4e-23
Identities = 51/90 (56%), Positives = 57/90 (63%)
Frame = +1
Query: 253 FGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCY 432
+GVKVGLTNYAAAY TG EYNVE +D PGAF CY
Sbjct: 36 YGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCY 95
Query: 433 LDVGLARTTTGARVFGAMKGAVDGGLNVPH 522
LD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 96 LDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
Score = 62.5 bits (145), Expect = 1e-09
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = +2
Query: 149 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 253
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 35
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 66.5 bits (155), Expect = 7e-11
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +1
Query: 454 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDADPK 561
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD++ K
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 36
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 528 QKIPWL*CRSKKFNAEVHRAHIL 596
++ P SK+FNAEVHR HI+
Sbjct: 26 KRFPGYDSESKEFNAEVHRKHIM 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,697,209
Number of Sequences: 237096
Number of extensions: 1981480
Number of successful extensions: 4005
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3996
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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