Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0531
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.25
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.25
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.4
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 3.1
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 5.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 7.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.5
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 20 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKY 145
KN++ +++Y+ K R +T+ K + N YN Y
Sbjct: 273 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 314
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 20 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKY 145
KN++ +++Y+ K R +T+ K + N YN Y
Sbjct: 284 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 325
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAY 196
TD RK ++ +++ K ++ ++V + N+D +AY
Sbjct: 288 TDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDCGSAIAY 326
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 611 QQHANQDVSPVYFSIELFGSA 549
Q++ +QD P+YF + F A
Sbjct: 429 QKYQDQDYQPIYFVADSFEDA 449
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 95 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQIP 140
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 95 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQIP 140
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 95 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQIP 140
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 95 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQIP 140
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 512 LSPPSTAPFIAPKTRAPVVVRAKP 441
+SP STA ++ KTR R P
Sbjct: 97 ISPASTAKALSDKTRFDYFARTVP 120
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 512 LSPPSTAPFIAPKTRAPVVVRAKP 441
+SP STA ++ KTR R P
Sbjct: 187 ISPASTAKALSDKTRFDYFARTVP 210
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 477 WSYEGCC*RWAQCSSFHQK 533
WS W CSSF Q+
Sbjct: 407 WSVNAGMWMWLSCSSFFQQ 425
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 328 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIP 373
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 172
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 328 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIP 373
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 172
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 328 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIP 373
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 172
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = -3
Query: 599 NQDVSPVYFSIELFGSAS*PGNLLME*GTLSPPSTAPFIAPKTRAP 462
N + P+Y++I P + G P PF++ + + P
Sbjct: 317 NNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQIP 362
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 172
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 217 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 247
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 271 DQPSHQTWQLM*ISSAHNMVTFN 203
++PS+ TW+L +S H T N
Sbjct: 7 NRPSYCTWELNATNSPHTCRTKN 29
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 525 GMRNIEPTVNSTLHSSKD 472
GM NIE + +T +SSK+
Sbjct: 193 GMNNIETYIVNTNYSSKN 210
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 172
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 80 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 172
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYKEKDRRYEKLHNE 258
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 11 KVVKNKQYFKRYQVKFKRRREGKTD 85
K KN+ +++Y+ K R KT+
Sbjct: 286 KSYKNENSYRKYRETSKERSRDKTE 310
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,007
Number of Sequences: 438
Number of extensions: 3625
Number of successful extensions: 25
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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