Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0530
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.29 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   6.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 42  RSYDSPSTFPSSFEAHSPYIRPESANIL 125
           +S+DS S   SSF  H P   P  ++IL
Sbjct: 738 KSFDSRSRQNSSFPGHGPTTAPMGSSIL 765


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 30  YNMIRSYDSPSTFPSSFEAHSPYIRPESAN 119
           YN+   +  P   P+ + AH   I PE+ N
Sbjct: 288 YNVHLMWSKPDLIPNYYIAHFINIDPENHN 317


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 117 NILASSYTCATPIGDSSVD 173
           N    SYTC  P+G S ++
Sbjct: 1   NQYVDSYTCTCPLGFSGIN 19


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 418 LQPIRDKYGTVDCSPSYNSHQD 353
           LQ +RD  G +   P+Y+  Q+
Sbjct: 23  LQEMRDVLGDIHAKPTYSDLQN 44


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 PERWVSRLVSDTSVDHSSFLSGQNFFRHV 530
           PE +V  LV    V+HS+ ++  N  +H+
Sbjct: 222 PEDYVEDLVGHIEVNHSAPITTCNKKQHL 250


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 27  QYNMIRSYDSPSTFPSSFEAHSPYIRPESA 116
           ++N  RS   P T        +PY RP ++
Sbjct: 209 RHNQSRSKRQPKTGREDQTRRNPYYRPRTS 238


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 331 DAEQEYYDPDVNYNLASNQQCHTY 402
           ++  ++ DP  N+N   NQ    Y
Sbjct: 201 ESSYQFNDPQFNFNYQYNQAYSNY 224


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 331 DAEQEYYDPDVNYNLASNQQCHTY 402
           ++  ++ DP  N+N   NQ    Y
Sbjct: 221 ESSYQFNDPQFNFNYQYNQAYSNY 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,890
Number of Sequences: 336
Number of extensions: 3534
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)