Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0530
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82083-1|AAB82068.1| 877|Homo sapiens metabotropic glutamate re... 33 1.1
AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane hel... 33 1.1
M94132-1|AAA59164.1| 984|Homo sapiens MUC2 protein. 32 1.4
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 32 1.4
M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 31 3.3
AF257166-1|AAG18515.1| 147|Homo sapiens intestinal mucin 2 prot... 31 3.3
BC072681-1|AAH72681.1| 843|Homo sapiens OTUD7B protein protein. 30 5.7
AL590487-4|CAI12651.1| 843|Homo sapiens OTU domain containing 7... 30 5.7
AJ293573-1|CAB97494.1| 858|Homo sapiens zinc finger protein Cez... 30 5.7
BC052993-1|AAH52993.1| 392|Homo sapiens family with sequence si... 30 7.5
BC000259-1|AAH00259.1| 392|Homo sapiens FAM53C protein protein. 30 7.5
AF251040-1|AAF63766.1| 392|Homo sapiens putative nuclear protei... 30 7.5
>U82083-1|AAB82068.1| 877|Homo sapiens metabotropic glutamate
receptor 6 protein protein.
Length = 877
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 352 RSIPALRQSE*GGSWLWAGTRLWSRNWDPRLELAKDAVGPVVFL 221
R + A RQ+ G +LW G+ W P L L AVG + L
Sbjct: 287 RVLEAARQANLTGHFLWVGSDSWGAKTSPILSLEDVAVGAITIL 330
>AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane helix
receptor protein.
Length = 1520
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 352 RSIPALRQSE*GGSWLWAGTRLWSRNWDPRLELAKDAVGPVVFL 221
R + A RQ+ G +LW G+ W P L L AVG + L
Sbjct: 319 RVLEAARQANLTGHFLWVGSDSWGAKTSPILSLEDVAVGAITIL 362
>M94132-1|AAA59164.1| 984|Homo sapiens MUC2 protein.
Length = 984
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 247 P*PTPTSDPNFVTTDGFLPKATNLLIPIDAEQEYYDP-DVNYNLASNQQCH 396
P PTP S P+ + T G P +++LI YY P + YN C+
Sbjct: 114 PTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCY 164
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 247 P*PTPTSDPNFVTTDGFLPKATNLLIPIDAEQEYYDP-DVNYNLASNQQCH 396
P PTP S P+ + T G P +++LI YY P + YN C+
Sbjct: 4309 PTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCY 4359
>M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 41. ).
Length = 278
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 247 P*PTPTSDPNFVTTDGFLPKATNLLIPIDAEQEYYDP 357
P PTP S P+ + T G P +++LI YY P
Sbjct: 235 PTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAP 271
>AF257166-1|AAG18515.1| 147|Homo sapiens intestinal mucin 2
protein.
Length = 147
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 247 P*PTPTSDPNFVTTDGFLPKATNLLIPIDAEQEYYDP 357
P PTP S P+ + T G P +++LI YY P
Sbjct: 103 PTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAP 139
>BC072681-1|AAH72681.1| 843|Homo sapiens OTUD7B protein protein.
Length = 843
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 MQYNMIRSYDSPSTFPSSFEAHSPYIRPESANILASSYTCATP-IGDSSVDTISS 185
++ +++ SY + P S +A +P +PES A +TP GDS +++ S
Sbjct: 420 VKLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAGDEPRSTPESGDSDKESVGS 474
>AL590487-4|CAI12651.1| 843|Homo sapiens OTU domain containing 7B
protein.
Length = 843
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 MQYNMIRSYDSPSTFPSSFEAHSPYIRPESANILASSYTCATP-IGDSSVDTISS 185
++ +++ SY + P S +A +P +PES A +TP GDS +++ S
Sbjct: 420 VKLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAGDEPRSTPESGDSDKESVGS 474
>AJ293573-1|CAB97494.1| 858|Homo sapiens zinc finger protein
Cezanne protein.
Length = 858
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 MQYNMIRSYDSPSTFPSSFEAHSPYIRPESANILASSYTCATP-IGDSSVDTISS 185
++ +++ SY + P S +A +P +PES A +TP GDS +++ S
Sbjct: 435 VKLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAGDEPRSTPESGDSDKESVGS 489
>BC052993-1|AAH52993.1| 392|Homo sapiens family with sequence
similarity 53, member C protein.
Length = 392
Score = 29.9 bits (64), Expect = 7.5
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Frame = +3
Query: 12 QSPTMQYNMIRSYDSPSTFPSSFEAHSPYIRPESANILA--SSYTC-ATPIGDSSVDTIS 182
QSP + + +R +PS AH PY P + LA SS C A+P S
Sbjct: 161 QSPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSRPCAASPQSGSWESDAE 220
Query: 183 SLDSIYPAXS*LNKNTTGPTAS----------LANSNLGSQFRDHRRVPAQSHEPPHSD* 332
SL P + GP AS ++ L + R R +P +P D
Sbjct: 221 SLSPCPPQRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQPCDLDA 280
Query: 333 RRAGILR 353
R+ G+ R
Sbjct: 281 RKTGVKR 287
>BC000259-1|AAH00259.1| 392|Homo sapiens FAM53C protein protein.
Length = 392
Score = 29.9 bits (64), Expect = 7.5
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Frame = +3
Query: 12 QSPTMQYNMIRSYDSPSTFPSSFEAHSPYIRPESANILA--SSYTC-ATPIGDSSVDTIS 182
QSP + + +R +PS AH PY P + LA SS C A+P S
Sbjct: 161 QSPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSRPCAASPQSGSWESDAE 220
Query: 183 SLDSIYPAXS*LNKNTTGPTAS----------LANSNLGSQFRDHRRVPAQSHEPPHSD* 332
SL P + GP AS ++ L + R R +P +P D
Sbjct: 221 SLSPCPPQRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQPCDLDA 280
Query: 333 RRAGILR 353
R+ G+ R
Sbjct: 281 RKTGVKR 287
>AF251040-1|AAF63766.1| 392|Homo sapiens putative nuclear protein
protein.
Length = 392
Score = 29.9 bits (64), Expect = 7.5
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Frame = +3
Query: 12 QSPTMQYNMIRSYDSPSTFPSSFEAHSPYIRPESANILA--SSYTC-ATPIGDSSVDTIS 182
QSP + + +R +PS AH PY P + LA SS C A+P S
Sbjct: 161 QSPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSRPCAASPQSGSWESDAE 220
Query: 183 SLDSIYPAXS*LNKNTTGPTAS----------LANSNLGSQFRDHRRVPAQSHEPPHSD* 332
SL P + GP AS ++ L + R R +P +P D
Sbjct: 221 SLSPCPPQRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQPCDLDA 280
Query: 333 RRAGILR 353
R+ G+ R
Sbjct: 281 RKTGVKR 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,138,263
Number of Sequences: 237096
Number of extensions: 2143354
Number of successful extensions: 8419
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8419
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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