Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0530
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.45 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.78 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   7.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.6  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = -2

Query: 577 VILYF----EFYIQSLKYTYTCRKKFWPDKNE 494
           VIL+F     F+ Q L Y Y     ++PD NE
Sbjct: 276 VILFFICWAPFHTQRLLYVYAQESDYYPDLNE 307


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 138 CNLMRVCSRTRVGCMASVLQTKRGMLMENRKNE 40
           CNLMR  +R ++  + S +Q     L  N K++
Sbjct: 455 CNLMRTMNRKQISELESNMQISPNELKPNDKSQ 487



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 9   RQSPTMQYNMIRSYDSPSTFPSSFEAHSPYI 101
           ++   M  NM+ +Y+S  +FP+  E   P++
Sbjct: 909 KEGKFMNVNMLDTYESVHSFPT--ETGLPFV 937



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 477  TSVDHSSFLSGQNFFRHVYVYFKL 548
            T  +H  F+SG +   HVY   K+
Sbjct: 984  TPFEHRHFISGIDSNLHVYAPLKI 1007


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 409 IRDKYGTVDCSPSYNSHQDR 350
           + D+Y  +DC P    H+D+
Sbjct: 479 VHDEYTCMDCGPGKWPHEDK 498


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 409 IRDKYGTVDCSPSYNSHQDR 350
           + D+Y  +DC P    H+D+
Sbjct: 569 VYDEYTCMDCGPGKWPHEDK 588


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 340 QEYYDPDVNYNLASNQQCHTYPG 408
           Q  +DPDV   L   +Q HT  G
Sbjct: 776 QTPFDPDVPIELQIQKQSHTPNG 798


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 262 LELAKDAVGPVVFLFNQL 209
           +E+AKDA  P++   N++
Sbjct: 238 IEMAKDAKVPIIVAINKI 255


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 565 NRVSPFNCNSPCL 603
           N VSP  C SP L
Sbjct: 9   NNVSPLQCTSPFL 21


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 334 AEQEYYDPDVNYNLASNQQCH 396
           ++ E+YD   NY++ SN   +
Sbjct: 52  SDAEWYDVGRNYDMESNMDMY 72


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 334 AEQEYYDPDVNYNLASNQQCH 396
           ++ E+YD   NY++ SN   +
Sbjct: 52  SDAEWYDVGRNYDMESNMDMY 72


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 314 FVALGRNPSVVTKLGSE 264
           F  +GRNP+V  KL  E
Sbjct: 343 FDLIGRNPTVQNKLYEE 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,022
Number of Sequences: 438
Number of extensions: 4394
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)