Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0529
         (596 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8II50 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_Q6YPK7 Cluster: Phosphatidylglycerophosphate synthase; ...    32   8.9  

>UniRef50_Q8II50 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1701

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 171  VIEVY*HR-FYLQKKNLLNLITFKN*IFKYGQLXYRXIS*YTFEYEKIFFFKQFNVXXII 347
            +I++Y H+ FY   KN++ +I + N       + Y     Y+F Y  +FF   FN+  II
Sbjct: 1365 LIDIYTHKYFYYNIKNIIYIINYIN----SSNIVYTNNKKYSFVY--VFFINYFNISVII 1418

Query: 348  SRI 356
            +++
Sbjct: 1419 NKL 1421


>UniRef50_Q6YPK7 Cluster: Phosphatidylglycerophosphate synthase;
           n=2; Candidatus Phytoplasma asteris|Rep:
           Phosphatidylglycerophosphate synthase - Onion yellows
           phytoplasma
          Length = 219

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 31  INLVSTFFGYVPIYTESTVKCDINMQNRF-FIVNYTDHCLKRFVVHKLSSKF 183
           + ++  FFG   +YT ST  CD N++  F ++ N  D CL   VV  + S F
Sbjct: 154 VAIICLFFG---LYTSSTFACDANLKKWFGYLSNIGDICLLVSVVLTIVSGF 202


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,473,247
Number of Sequences: 1657284
Number of extensions: 8111599
Number of successful extensions: 16048
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16048
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)