Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0528
(415 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 115 3e-25
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 91 6e-18
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 85 7e-16
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 74 1e-12
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 71 1e-11
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 70 2e-11
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 69 4e-11
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 65 5e-10
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 63 2e-09
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 62 4e-09
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 56 3e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 53 3e-06
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 52 4e-06
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 51 8e-06
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 50 1e-05
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 50 1e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 6e-05
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 48 1e-04
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 47 1e-04
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 46 2e-04
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 46 4e-04
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 43 0.003
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 43 0.003
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 42 0.005
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 42 0.007
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 41 0.009
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 40 0.020
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 39 0.035
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 38 0.062
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.76
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 33 1.8
UniRef50_A0B770 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_A1D3E0 Cluster: Putative uncharacterized protein; n=1; ... 32 4.0
UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1; Halo... 32 4.0
UniRef50_Q4RYN6 Cluster: Chromosome 16 SCAF14974, whole genome s... 31 9.3
UniRef50_A2TIW1 Cluster: UL28 protein; n=2; Herpesviridae|Rep: U... 31 9.3
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 9.3
UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.3
UniRef50_A7AS23 Cluster: PBS lyase HEAT-like repeat domain conta... 31 9.3
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 115 bits (277), Expect = 3e-25
Identities = 58/85 (68%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 178
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 179 HAQYEKRAMELLKVSKDKRALKFLK 253
HA YEKR MELLKVSKDKRALKFLK
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLK 84
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMRK 327
K + + L+ RLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 91.5 bits (217), Expect = 6e-18
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = +2
Query: 2 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 181
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 182 AQYEKRAMELLKVSKDKRALKFLK 253
A YE+RAMELLKVSKDKRALKF+K
Sbjct: 51 APYERRAMELLKVSKDKRALKFIK 74
Score = 48.8 bits (111), Expect = 4e-05
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMRK 327
K + + ++ R+GTHIRAKRKREELSNVLA MRK
Sbjct: 65 KDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 84.6 bits (200), Expect = 7e-16
Identities = 39/52 (75%), Positives = 43/52 (82%)
Frame = +2
Query: 98 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLK
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLK 54
Score = 48.4 bits (110), Expect = 6e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMRK 327
K + + L+ RLGTHIRAKRKREELSN+L QM K
Sbjct: 45 KDKRALKFLKRRLGTHIRAKRKREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 74.1 bits (174), Expect = 1e-12
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +2
Query: 20 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 199
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 200 AMELLKVSKDKRALKFLK 253
+E+L++SKDKRALKFLK
Sbjct: 59 VLEMLRISKDKRALKFLK 76
Score = 37.9 bits (84), Expect = 0.081
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMRK 327
K + + L+ R+GTH RAK KREEL NV+ RK
Sbjct: 67 KDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 70.5 bits (165), Expect = 1e-11
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = +2
Query: 8 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 187
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 188 YEKRAMELLKVSKDKRALKFLK 253
YEKR ELLKV KDKRALK K
Sbjct: 56 YEKRITELLKVGKDKRALKVAK 77
Score = 37.1 bits (82), Expect = 0.14
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMR 324
K + +V + +LGTH RAK+KREE++ V+ +MR
Sbjct: 68 KDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 70.1 bits (164), Expect = 2e-11
Identities = 42/102 (41%), Positives = 53/102 (51%)
Frame = +2
Query: 8 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 187
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 188 YEKRAMELLKVSKDKRALKFLKHDWAHTSAPRGSVKNLATCS 313
YEKR ELLKV KDKRALK + H+ + + CS
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVGHSQESKEEERGDVQCS 97
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 68.9 bits (161), Expect = 4e-11
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 APRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHA 184
APR IAVGL KGH TT I + +RP+R KGL+TK + V +++REV G A
Sbjct: 11 APRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVCGFA 62
Query: 185 QYEKRAMELLK---VSKDKRALKFLK 253
YE+ +EL+K S KRALKF K
Sbjct: 63 PYERHMIELIKTGSASAQKRALKFAK 88
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 65.3 bits (152), Expect = 5e-10
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +2
Query: 74 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 254 HDWAHTSAPRGSVKNLAT 307
+G ++ L +
Sbjct: 73 KRLGTLKRAKGKIEELTS 90
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 63.3 bits (147), Expect = 2e-09
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = +2
Query: 26 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 205
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 206 ELLKVSKDKRALKFLK 253
ELLKV KDKRALK K
Sbjct: 62 ELLKVGKDKRALKVAK 77
Score = 40.7 bits (91), Expect = 0.012
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMR 324
K + +V + +LGTH RAKRKREE+S+VL +MR
Sbjct: 68 KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 62.1 bits (144), Expect = 4e-09
Identities = 36/83 (43%), Positives = 46/83 (55%)
Frame = +2
Query: 5 APRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHA 184
A R + G+ KG TT I RP+ KGL+T+ FVR ++REV G +
Sbjct: 97 AQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREVAGFS 146
Query: 185 QYEKRAMELLKVSKDKRALKFLK 253
YEKR MELL+ SKDK+A K K
Sbjct: 147 PYEKRVMELLRNSKDKKAKKLTK 169
Score = 33.1 bits (72), Expect = 2.3
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMRK 327
K + ++ + RLGT +R+KRK EELS V+ + R+
Sbjct: 160 KDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 56.0 bits (129), Expect = 3e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +2
Query: 50 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 220
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 221 SKDKRALKFL 250
+DK AL+F+
Sbjct: 69 FQDKLALRFM 78
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 52.8 bits (121), Expect = 3e-06
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +2
Query: 20 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 199
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 200 AMELLKVSKDKRALKFLKHDWAHTSAPRGSV 292
MELL V ++ L + SAPR SV
Sbjct: 60 MMELLLVI--RKLLNSQRPVLELISAPRRSV 88
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 52.4 bits (120), Expect = 4e-06
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +2
Query: 2 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 181
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 182 AQYEKRAMELLKVSKDKRALKFLK 253
+ YE+R ++L++ S +KRA K K
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAK 74
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 51.2 bits (117), Expect = 8e-06
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2
Query: 128 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAK 69
Score = 34.7 bits (76), Expect = 0.76
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 256 RLGTHIRAKRKREELSNVLAQMR 324
RLGTH+RAKRKRE+++ L R
Sbjct: 71 RLGTHLRAKRKREQMAEALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 50.4 bits (115), Expect = 1e-05
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +2
Query: 2 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 181
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 182 AQYEKRAMELLKVSKDKRALKFLK 253
Y+ + L KVS DK A KF+K
Sbjct: 51 MSYDWCTVVLPKVSNDKCAFKFIK 74
Score = 35.5 bits (78), Expect = 0.43
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 220 VKRQACS-EVLEARLGTHIRAKRKREELSNVLAQMRK 327
V C+ + ++ R+G HI KRK EELS V+A MRK
Sbjct: 63 VSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 50.4 bits (115), Expect = 1e-05
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +2
Query: 8 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 187
PR I G KG+KTT+ A R D+ L K + V+ ++ ++VG +
Sbjct: 11 PRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLVGFSP 60
Query: 188 YEKRAMELLKVSKDKRALKFLK 253
E+R ELL+V KDKRALKF K
Sbjct: 61 MERRVQELLRVGKDKRALKFCK 82
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 6e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 86 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 235
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +2
Query: 11 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 190
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 191 EKRAMELLKVSKDK 232
EKR +EL K ++ K
Sbjct: 56 EKRIIELFKTNQPK 69
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 47.2 bits (107), Expect = 1e-04
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +2
Query: 8 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 187
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 188 YEKRAMELLKV---SKDKRALKFLK 253
YEKR +EL+KV + KR+LK+ K
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAK 81
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2
Query: 119 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
K + TK +RD++RE+ G + YE+R ELLK DKRALK K
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAK 79
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 45.6 bits (103), Expect = 4e-04
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +2
Query: 8 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 187
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 188 YEKRAMELLKVSKDKRALKFLK 253
EKR E L+V K+KRALK+ K
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCK 77
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = +1
Query: 244 VLEARLGTHIRAKRKREELSNVLAQMRK 327
+++ R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 74 LIKKRVGTHVRAKRETEELSNVLAAIRK 101
Score = 35.5 bits (78), Expect = 0.43
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2
Query: 191 EKRAMELLKVSKDKRALKFLK 253
++RAMELLKVSKDKR L+ +K
Sbjct: 56 QRRAMELLKVSKDKRTLRLIK 76
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 42.7 bits (96), Expect = 0.003
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +2
Query: 137 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
H +FV+ +++E G A YE +ELL+++KD+ AL++ K
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAK 67
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Frame = +2
Query: 131 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLK 253
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAK 99
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 41.5 bits (93), Expect = 0.007
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 59 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 235
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 236 ALKFLK 253
ALKF++
Sbjct: 75 ALKFIQ 80
Score = 36.3 bits (80), Expect = 0.25
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMRK 327
K + + ++ LGTHI AKRK ELSNVLA R+
Sbjct: 71 KDKQALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 41.1 bits (92), Expect = 0.009
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSNVLAQMR 324
KR+ +LGTH RAKRKREE+SNVL +MR
Sbjct: 22 KRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 39.9 bits (89), Expect = 0.020
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 101 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLK 63
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 39.1 bits (87), Expect = 0.035
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 131 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 253
TK V D++RE G YE+ M+LL+ DK+AL + K
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAK 65
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 38.3 bits (85), Expect = 0.062
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 223 KRQACSEVLEARLGTHIRAKRKREELSN 306
K + + ++ R+GTHIRAKRKREELSN
Sbjct: 5 KDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.76
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 2 MAPRFEIAVGLRKGHKTTK 58
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 358 NGDGDEPGRLPSSSERARC*VLHASSWR 275
+G GD P + P SS + RC L SSWR
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWR 126
>UniRef50_A0B770 Cluster: Putative uncharacterized protein; n=1;
Methanosaeta thermophila PT|Rep: Putative
uncharacterized protein - Methanosaeta thermophila
(strain DSM 6194 / PT) (Methanothrixthermophila (strain
DSM 6194 / PT))
Length = 203
Score = 33.1 bits (72), Expect = 2.3
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 116 LKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKHDWAHTSAPRGSVK 295
LKG+ K +FV D G+ E + +++S+DK AL+ +K WA PR SV+
Sbjct: 120 LKGISPKALEFVHDAGS--AGNPVSEGKISRRVRLSEDKEALEKIKQLWA--LDPRPSVQ 175
Query: 296 NLAT 307
+A+
Sbjct: 176 EIAS 179
>UniRef50_A1D3E0 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 402
Score = 32.3 bits (70), Expect = 4.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +2
Query: 77 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSK----DKRALK 244
G+TD+ I RP R +Q H K V + +R VG A + + + K D + +K
Sbjct: 278 GVTDEEIATRPRRYLNIQMSHEK-VHEALRPFVGGAYTDDNGNIMRQADKKLLGDGKTVK 336
Query: 245 FLKHDWAHTSAPR 283
W TS R
Sbjct: 337 KTATSWNDTSGIR 349
>UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Molybdopterin
oxidoreductase - Halorubrum lacusprofundi ATCC 49239
Length = 996
Score = 32.3 bits (70), Expect = 4.0
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 77 GITDKAIRIRPARLKGLQTKHSKFVRDLVREV--VGHAQYEKRAMELLKVSKDKRALKFL 250
G TD I R L L+ + S++ + V E+ VG ++K A E +V + K
Sbjct: 405 GTTDGDIETRSVWLN-LRDELSEYTPERVNEITGVGRQTHQKIAREFAEVDRAKIIHGKG 463
Query: 251 KHDWAHTSAPRGSVKNLATCSLR*GRQ 331
+DW H S++ L T + GRQ
Sbjct: 464 VNDWYHNDLGNRSIQLLVTLTGNLGRQ 490
>UniRef50_Q4RYN6 Cluster: Chromosome 16 SCAF14974, whole genome
shotgun sequence; n=5; Clupeocephala|Rep: Chromosome 16
SCAF14974, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 551
Score = 31.1 bits (67), Expect = 9.3
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +2
Query: 89 KAIRIRPARLKGLQ---TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKD-KRALKFLKH 256
+A+ R +L LQ T+ + +R+ + +QY+ +EL+ + + K A++ L
Sbjct: 19 RAVEFRLQQLHALQKMVTEKEADISSALRQDINRSQYDTPLLELISIENEIKLAIEKLS- 77
Query: 257 DWAHTSAPRGSVKNLATCS 313
+WA APR +NL T S
Sbjct: 78 EWA---APRPVERNLLTIS 93
>UniRef50_A2TIW1 Cluster: UL28 protein; n=2; Herpesviridae|Rep: UL28
protein - Duck enteritis virus
Length = 803
Score = 31.1 bits (67), Expect = 9.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 333 GCLPHLSEHVAKFFTLPLGADVCAQSCFKNF 241
G LPHL E +A+F P GAD S F+ F
Sbjct: 649 GLLPHLREELARFMVTPRGAD-WTTSTFQGF 678
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 9.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 95 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 187
+R ARL G+QTKH+K D V+ AQ
Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 1489
Score = 31.1 bits (67), Expect = 9.3
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 98 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYE--KRAMELLKVSKDKRALKFLKHDWAHT 271
R+R R+ GLQ H V DL AQ E +RA E + +RA + H+ A
Sbjct: 211 RLRGLRVAGLQAAHRTLVHDLEHAAQARAQQERRRRAAEHVLPQHVRRAERIGDHERAGA 270
Query: 272 SAPRGSVKNL 301
R L
Sbjct: 271 GDERAEADRL 280
>UniRef50_A7AS23 Cluster: PBS lyase HEAT-like repeat domain
containing protein; n=6; Piroplasmida|Rep: PBS lyase
HEAT-like repeat domain containing protein - Babesia
bovis
Length = 332
Score = 31.1 bits (67), Expect = 9.3
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 119 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKHDWAHTSAPRGSVK 295
K L+ + F+R + V+G A+ E+ A L+++ +D ++H+ A A G K
Sbjct: 60 KALEVHYDTFLRHEIAYVIGQAECEEAADVLVRLLEDTNEDPMVRHEAAEAIAAIGDKK 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,231,984
Number of Sequences: 1657284
Number of extensions: 5988351
Number of successful extensions: 15363
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 15118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15353
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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