Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0528
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.6  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   6.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.3  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    20   8.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   8.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   8.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 106 PNSDGFVCDTLAASGYFSCFVAFSQAYCDF 17
           P  +G VC T+ A    +C   F    C+F
Sbjct: 346 PCQNGGVCTTIHAGHKCTCPEGFYGKNCEF 375


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 123 VFKRNTPSLSVI*YAKLSDTLNMRRGLWSYLRC 221
           +F    P L+ I    +  TLN RR L   L+C
Sbjct: 19  IFTCVKPQLTRISDEAIESTLNDRRYLLRQLKC 51


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 369 IYHLMVMVMSLGGCLPHLSE 310
           +YH+  M  S  GC   ++E
Sbjct: 342 LYHISFMACSSAGCSQKVAE 361


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 305 LLSSSRFLLARMCVPNRASRTSEHAC 228
           L + S FL+ R  +P  ++    H C
Sbjct: 187 LFNLSTFLIPRSYIPPLSTSMRSHLC 212


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 305 LLSSSRFLLARMCVPNRASRTSEHAC 228
           L + S FL+ R  +P  ++    H C
Sbjct: 347 LFNLSTFLIPRSYIPPLSTSMRSHLC 372


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 305 LLSSSRFLLARMCVPNRASRTSEHAC 228
           L + S FL+ R  +P  ++    H C
Sbjct: 347 LFNLSTFLIPRSYIPPLSTSMRSHLC 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,401
Number of Sequences: 336
Number of extensions: 1380
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)