Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0527
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058640-1|AAL13869.1|  950|Drosophila melanogaster LD33980p pro...    28   8.7  
AF197910-1|AAF15596.1| 1490|Drosophila melanogaster Numb-associa...    28   8.7  
AE014134-3001|AAN11019.1|  950|Drosophila melanogaster CG10637-P...    28   8.7  
AE014134-3000|AAF53727.2| 1488|Drosophila melanogaster CG10637-P...    28   8.7  

>AY058640-1|AAL13869.1|  950|Drosophila melanogaster LD33980p
           protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 270 ELFSIEDYPQILKLEEYDPLQELHHLIHSKFP 365
           +LF +E +PQ+++  E +P    HH IH +FP
Sbjct: 603 DLFGLEPFPQVIRTIEQNP---QHHQIH-QFP 630


>AF197910-1|AAF15596.1| 1490|Drosophila melanogaster Numb-associated
            kinase protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 270  ELFSIEDYPQILKLEEYDPLQELHHLIHSKFP 365
            +LF +E +PQ+++  E +P    HH IH +FP
Sbjct: 1141 DLFGLEPFPQVIRTIEQNP---QHHQIH-QFP 1168


>AE014134-3001|AAN11019.1|  950|Drosophila melanogaster CG10637-PB,
           isoform B protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 270 ELFSIEDYPQILKLEEYDPLQELHHLIHSKFP 365
           +LF +E +PQ+++  E +P    HH IH +FP
Sbjct: 603 DLFGLEPFPQVIRTIEQNP---QHHQIH-QFP 630


>AE014134-3000|AAF53727.2| 1488|Drosophila melanogaster CG10637-PA,
            isoform A protein.
          Length = 1488

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 270  ELFSIEDYPQILKLEEYDPLQELHHLIHSKFP 365
            +LF +E +PQ+++  E +P    HH IH +FP
Sbjct: 1141 DLFGLEPFPQVIRTIEQNP---QHHQIH-QFP 1168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,231,990
Number of Sequences: 53049
Number of extensions: 286197
Number of successful extensions: 480
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)