Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0526
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    27   0.56 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    27   0.56 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   3.0  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    23   6.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.0  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    23   9.0  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 202 CSFNTL*TIGISRPSTLKTTISPTRTGSS 116
           C+FNTL T+ + R +T   +I PT  GSS
Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 202 CSFNTL*TIGISRPSTLKTTISPTRTGSS 116
           C+FNTL T+ + R +T   +I PT  GSS
Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 330 NPLARPTTSFLVSHSW 283
           NP++RPT + ++ H W
Sbjct: 241 NPISRPTITEVLDHPW 256


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 222 VKFLTKGDNNSLMTEAC 272
           V+F+T  DNN  + E+C
Sbjct: 16  VQFVTAADNNESVIESC 32


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 240 LWLRTLLCHCSFHVVSILCEQS 175
           +WLR+  CH S   VS + + S
Sbjct: 17  VWLRSCSCHSSVCAVSFVMQCS 38


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 264 LSSSYYCHLWLRTLLCH 214
           L S+Y+C+ W+    CH
Sbjct: 75  LQSAYHCNEWIAGNECH 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,130
Number of Sequences: 2352
Number of extensions: 13091
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)