Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0525
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051681-1|AAK93105.1|  777|Drosophila melanogaster LD23102p pro...    29   3.8  
AF035275-1|AAB87630.1|  777|Drosophila melanogaster zinc finger ...    29   3.8  
AE014134-1687|AAF52805.2|  777|Drosophila melanogaster CG3998-PA...    29   3.8  

>AY051681-1|AAK93105.1|  777|Drosophila melanogaster LD23102p
           protein.
          Length = 777

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 270 KSIVNIVKYVFH*KNWYPPAGFEHR-CIVRY 181
           K++V++  YV H K   PP GFE R C  R+
Sbjct: 38  KALVSLAGYVKHVKKHQPPGGFECRHCDARF 68


>AF035275-1|AAB87630.1|  777|Drosophila melanogaster zinc finger 30C
           protein.
          Length = 777

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 270 KSIVNIVKYVFH*KNWYPPAGFEHR-CIVRY 181
           K++V++  YV H K   PP GFE R C  R+
Sbjct: 38  KALVSLAGYVKHVKKHQPPGGFECRHCDARF 68


>AE014134-1687|AAF52805.2|  777|Drosophila melanogaster CG3998-PA
           protein.
          Length = 777

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 270 KSIVNIVKYVFH*KNWYPPAGFEHR-CIVRY 181
           K++V++  YV H K   PP GFE R C  R+
Sbjct: 38  KALVSLAGYVKHVKKHQPPGGFECRHCDARF 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,783,539
Number of Sequences: 53049
Number of extensions: 554443
Number of successful extensions: 1125
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)