Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0523
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 400 VYYQR-WQSVHLDKKMLL 350
           VY  R WQ +HL+KK +L
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 462 IASDSSQLSQFNVRYKRLDESSIIKGGNL 376
           IAS  ++ S++  +Y  +D   IIK   L
Sbjct: 14  IASSLAENSKYTTKYDNVDLDEIIKSDRL 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 461 LHQIRHNYLNSMFDTNV 411
           LH++R+NY +   + NV
Sbjct: 324 LHELRNNYFHMDLENNV 340


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 5/21 (23%), Positives = 15/21 (71%)
 Frame = +3

Query: 432 IEIIVTNLMQFVVINYKVFVC 494
           +++I+T  +  + ++Y ++VC
Sbjct: 180 VQLILTQAIFLMFVSYNIYVC 200


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 5/21 (23%), Positives = 15/21 (71%)
 Frame = +3

Query: 432 IEIIVTNLMQFVVINYKVFVC 494
           +++I+T  +  + ++Y ++VC
Sbjct: 106 VQLILTQAIFLMFVSYNIYVC 126


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 461 LHQIRHNYLNSMFDTNV 411
           LH++R+NY +   + NV
Sbjct: 324 LHELRNNYFHMDLENNV 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,410
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)