Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0522
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 105 1e-21
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 102 6e-21
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 102 6e-21
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 102 6e-21
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 102 8e-21
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 100 2e-20
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 97 2e-19
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 97 3e-19
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 97 4e-19
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 95 1e-18
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 95 2e-18
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 93 6e-18
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 88 1e-16
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 88 1e-16
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 88 2e-16
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 87 3e-16
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 87 4e-16
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 85 1e-15
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 84 3e-15
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 84 3e-15
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 82 9e-15
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 81 2e-14
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 81 3e-14
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 81 3e-14
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 79 1e-13
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 77 3e-13
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 77 5e-13
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 76 6e-13
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 76 8e-13
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 74 2e-12
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 73 7e-12
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 73 7e-12
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 73 7e-12
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 73 7e-12
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 73 7e-12
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 71 2e-11
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 71 3e-11
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 69 7e-11
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 68 2e-10
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 67 3e-10
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 67 4e-10
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 67 4e-10
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 65 1e-09
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 64 3e-09
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 64 3e-09
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 63 4e-09
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 63 6e-09
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 62 8e-09
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 62 1e-08
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 62 1e-08
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 61 2e-08
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 60 3e-08
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 60 3e-08
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 60 6e-08
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 59 1e-07
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 58 2e-07
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 56 5e-07
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 56 5e-07
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 54 2e-06
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 3e-06
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 54 4e-06
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 54 4e-06
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 53 5e-06
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 52 1e-05
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 50 4e-05
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 48 1e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 48 1e-04
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 48 2e-04
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 48 2e-04
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 48 2e-04
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 47 3e-04
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 46 7e-04
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 45 0.001
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 44 0.004
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 42 0.009
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 42 0.012
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.027
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 40 0.036
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 40 0.063
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 39 0.084
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 39 0.11
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 39 0.11
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 38 0.15
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 38 0.19
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 38 0.19
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 37 0.45
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 37 0.45
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 37 0.45
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 36 0.59
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 35 1.4
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 35 1.4
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 35 1.8
UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 34 2.4
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 34 2.4
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 3.1
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 33 4.2
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 33 7.3
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 7.3
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 33 7.3
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 32 9.6
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 105 bits (251), Expect = 1e-21
Identities = 61/122 (50%), Positives = 68/122 (55%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FFICIYLH+GRGIYY S+ L YVLP GQ+SFW ATVITNL
Sbjct: 91 FFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATVITNL 150
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQGSNNPL 614
L AIPYLG LV + GGFAVDNAT F F F + F + GSNNP+
Sbjct: 151 LYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNPI 210
Query: 615 GL 620
GL
Sbjct: 211 GL 212
Score = 103 bits (248), Expect = 3e-21
Identities = 50/93 (53%), Positives = 62/93 (66%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
R +HP+FKI NN LCLIIQI+TGLFL ++YTA+I +AFY
Sbjct: 6 RNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFY 65
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
VN+ICR+VNYG ++RTLHANGASFF F IY+
Sbjct: 66 SVNHICRDVNYGWLLRTLHANGASFF-FICIYL 97
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 102 bits (245), Expect = 6e-21
Identities = 58/124 (46%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGATVITNL
Sbjct: 7 FFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGATVITNL 66
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYY--FYTKQGSNN 608
SAIP++GT LV I GGF+V NAT F F F++ F S+ + F + G+NN
Sbjct: 67 FSAIPFIGTDLVQWIWGGFSVGNATLTRF--FTFHFILPFIVLAASLVHILFLHQAGANN 124
Query: 609 PLGL 620
PLG+
Sbjct: 125 PLGI 128
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 102 bits (245), Expect = 6e-21
Identities = 58/123 (47%), Positives = 70/123 (56%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FFIC++LHIGRG+YY SF YVLP GQ+SFWGATVITN
Sbjct: 89 MFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITN 148
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQGSNNP 611
LLSAIPY+GT LV I GG++VD+ T F F F + F + GSNNP
Sbjct: 149 LLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNP 208
Query: 612 LGL 620
LG+
Sbjct: 209 LGI 211
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RK +P+ K+IN+ CLI+QI TGLFL ++Y+ + AF
Sbjct: 5 RKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ +I R+VNYG IIR LHANGAS FF+ F++I
Sbjct: 65 SIAHITRDVNYGWIIRYLHANGASMFFICLFLHI 98
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 102 bits (245), Expect = 6e-21
Identities = 57/123 (46%), Positives = 69/123 (56%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FFIC+++HIGRG+YY S+ YVLP GQ+SFWGATVITN
Sbjct: 89 MFFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITN 148
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQGSNNP 611
LLSAIPY+GT LV I GGF+VD AT F F F + F + GSNNP
Sbjct: 149 LLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNP 208
Query: 612 LGL 620
G+
Sbjct: 209 TGI 211
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+ KI+NN +CLI+QI+TGLFL ++YT++ AF
Sbjct: 5 RKTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
V +ICR+VNYG IIR +HANGAS FF+ F++I
Sbjct: 65 SVTHICRDVNYGWIIRYMHANGASMFFICLFMHI 98
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 102 bits (244), Expect = 8e-21
Identities = 53/94 (56%), Positives = 59/94 (62%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FFICIYLHIGRG+YY S+ K YVLP GQ+SFWGATVITNL
Sbjct: 86 FFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL 145
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIF 536
LSA+PY+G LV I GGF+VDNAT F F F
Sbjct: 146 LSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHF 179
Score = 102 bits (244), Expect = 8e-21
Identities = 53/94 (56%), Positives = 59/94 (62%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FFICIYLHIGRG+YY S+ K YVLP GQ+SFWGATVITNL
Sbjct: 273 FFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL 332
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIF 536
LSA+PY+G LV I GGF+VDNAT F F F
Sbjct: 333 LSAVPYMGNALVQWIWGGFSVDNATLTRFFAFHF 366
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/93 (50%), Positives = 59/93 (63%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 1 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFS 60
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
V +ICR+VNYG IIR LHANGASFF F IY+
Sbjct: 61 SVVHICRDVNYGWIIRNLHANGASFF-FICIYL 92
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/93 (50%), Positives = 59/93 (63%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 188 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFS 247
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
V +ICR+VNYG IIR LHANGASFF F IY+
Sbjct: 248 SVVHICRDVNYGWIIRNLHANGASFF-FICIYL 279
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 100 bits (240), Expect = 2e-20
Identities = 57/123 (46%), Positives = 69/123 (56%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FFIC++LH+GRG+YY S+ YVLP GQ+SFWGATVITN
Sbjct: 89 MFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITN 148
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQGSNNP 611
LLSAIPY+G+ LV I GGF+VD AT F F F + F + GSNNP
Sbjct: 149 LLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNP 208
Query: 612 LGL 620
GL
Sbjct: 209 SGL 211
Score = 89.4 bits (212), Expect = 6e-17
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+ KIIN+ +CLIIQI+TGLFL ++YT++ AF
Sbjct: 5 RKTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
V +ICR+VNYG +IR LHANGAS FF+ F+++
Sbjct: 65 SVTHICRDVNYGWLIRYLHANGASMFFICLFLHV 98
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/86 (55%), Positives = 55/86 (63%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FF CIYLHIGRG+YY S LK YVLP GQ+SFWGATVITN
Sbjct: 46 MFFFCIYLHIGRGLYYGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITN 105
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT 509
L SA+PY+G LV+ GGFA+DNAT
Sbjct: 106 LSSALPYIGPTLVHWTWGGFAIDNAT 131
Score = 66.5 bits (155), Expect = 5e-10
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 118 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS F F IY+
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFC-IYL 53
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 97.1 bits (231), Expect = 3e-19
Identities = 56/124 (45%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FFI +Y+HI RG+Y+ SF LK + YVLP GQ+SFWGATVITNL
Sbjct: 87 FFIFLYIHIARGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNL 146
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYT--KQGSNN 608
LSAIPY+GT + I GGF+VDN T F F ++ F I + ++ + GS+N
Sbjct: 147 LSAIPYIGTSITQWIWGGFSVDNPTLTRF--FTLHFMLPFILTVLIIIHIFSLHETGSSN 204
Query: 609 PLGL 620
PLG+
Sbjct: 205 PLGI 208
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN ASFF F F+YI
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFF-FIFLYI 93
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 96.7 bits (230), Expect = 4e-19
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FF+ IYLHIGRG+YY SF++K L YVLP GQ+SFWGATVITNL
Sbjct: 101 FFMLIYLHIGRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNL 160
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q-*SIYYFYTKQ-GSNN 608
A+PY+G+ L+ + GG V +AT F F+ ++ S F +++ F+ + GS+N
Sbjct: 161 FGAVPYVGSTLMEWVWGGHCVGDATLKRF--FVLHFVSPFIIAALVALHLFFLHETGSSN 218
Query: 609 PLGL 620
PLG+
Sbjct: 219 PLGV 222
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS FF+ +++I
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 95.1 bits (226), Expect = 1e-18
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +3
Query: 51 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 230
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 231 ITC*WSF-IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 407
ITC + ++ + +++ ++ + YVLP GQ+SF
Sbjct: 84 ITCKRGINLLYLFMSSRWSSNMFW-ILHILFTWTTGVVLLLLVMMTAFVGYVLPWGQMSF 142
Query: 408 WGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFY 587
WGATVITNL+SA+PY+GT++V + GGFAVDNAT F F F + F
Sbjct: 143 WGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIAAMVILHLLFL 202
Query: 588 TKQGSNNPLGL 620
+ GSNNP G+
Sbjct: 203 HQTGSNNPAGM 213
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 94.7 bits (225), Expect = 2e-18
Identities = 49/94 (52%), Positives = 57/94 (60%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FFIC+Y+HI RG+YY S+ K YVLP GQ+SFWGATVITNL
Sbjct: 90 FFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNL 149
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIF 536
LSA+PY+G LV I GGF+VD AT F F F
Sbjct: 150 LSAVPYMGDTLVQWIWGGFSVDXATLTRFFAFHF 183
Score = 89.4 bits (212), Expect = 6e-17
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RKTHP+ KI N LCLI QI+TGLFL ++YT++I AF
Sbjct: 5 RKTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
V +ICR+VNYG +IR+LHANGASFF F +Y+
Sbjct: 65 SVTHICRDVNYGWLIRSLHANGASFF-FICLYM 96
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 92.7 bits (220), Expect = 6e-18
Identities = 58/127 (45%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FFICIY+HI RG+YY + K V L YVLP GQ+SFW ATVITN
Sbjct: 81 LFFICIYIHIARGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITN 140
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFI--FYYRSLF*Y*Q*SIYYFYT-KQ 596
LL+AIPYLG + + GGF++++ T F HFI F SL SI+ +
Sbjct: 141 LLTAIPYLGVAVTTWLWGGFSINDPTLTRFCALHFILPFIIISLS-----SIHIILLHNE 195
Query: 597 GSNNPLG 617
GSNNPLG
Sbjct: 196 GSNNPLG 202
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYIS 282
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS FF+ +I+I+
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 88.2 bits (209), Expect = 1e-16
Identities = 44/92 (47%), Positives = 56/92 (60%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RK+HP+ KI N+ LCLI QI+TGLFL ++YT++I AF
Sbjct: 5 RKSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFLFAFIY 276
V +ICR+VNYG +IR +HANGASFF F IY
Sbjct: 65 SVTHICRDVNYGWLIRNMHANGASFF-FICIY 95
Score = 39.1 bits (87), Expect = 0.084
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLK 317
FFICIY HIGRG+YY S+ K
Sbjct: 90 FFICIYFHIGRGLYYGSYLYK 110
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 88.2 bits (209), Expect = 1e-16
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FFI +YLHI RG+YY S++ ++V YVLP GQ+SFWGATVI
Sbjct: 94 MFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVI 153
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYT--KQG 599
T+L SAIP +G +V + GGF+VDNAT F F +Y F S+ + + G
Sbjct: 154 TSLASAIPVVGDTIVTWLWGGFSVDNATLNRF--FSLHYLLPFILVGASLLHLAALHQYG 211
Query: 600 SNNPLGL 620
SNNPLG+
Sbjct: 212 SNNPLGV 218
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/60 (46%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS FF+ +++I
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 87.8 bits (208), Expect = 2e-16
Identities = 54/124 (43%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FF C+Y HIGRG+YY + + V L YVLP GQ+SFWGATVITNL
Sbjct: 94 FFFCMYAHIGRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNL 153
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIFYYRSLF*Y*Q*SIYYFYTKQGSNN 608
L+AIP +G+ LV + GGF+V T F HFI + L + + K GS+N
Sbjct: 154 LTAIPMVGSPLVKWVWGGFSVSGVTLTRFYSLHFILPF-VLSMLVLGHVILLHDK-GSSN 211
Query: 609 PLGL 620
PLG+
Sbjct: 212 PLGI 215
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLF 264
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS F F
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFF 96
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 87.0 bits (206), Expect = 3e-16
Identities = 52/131 (39%), Positives = 68/131 (51%)
Frame = +3
Query: 228 NITC*WSFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 407
NI S +FFICIY HI RG+YY S+ K V Y LP GQ+S+
Sbjct: 96 NIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSY 155
Query: 408 WGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFY 587
WGATVITN+LS P +G ++ + GG+ V NAT F F + +F
Sbjct: 156 WGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFLHLFFL 215
Query: 588 TKQGSNNPLGL 620
++GSNNPLG+
Sbjct: 216 HEKGSNNPLGI 226
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/92 (36%), Positives = 52/92 (56%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
R T+ + KI+N+ LCL+IQ+++GL L+ +YTA+ ++AF
Sbjct: 20 RSTNKLVKIMNDSFYDLPCPVNLNAWWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFD 79
Query: 181 RVNYICRNVNYG*IIRTLHANGASFFLFAFIY 276
V +I RNV G ++R +HANG+S F F IY
Sbjct: 80 SVVHIMRNVEKGWMLRNIHANGSSMF-FICIY 110
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 86.6 bits (205), Expect = 4e-16
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVIT 428
FFI +YLHIGR +YY S+ L YVLP GQ+SFWGATVIT
Sbjct: 89 FFIWVYLHIGRNLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVIT 148
Query: 429 NLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYT--KQGS 602
NLLSAIP++GT V + GGF+VDNAT F F +Y F + + + GS
Sbjct: 149 NLLSAIPWIGTDFVLFVWGGFSVDNATLNRF--FSLHYLLPFILAALVVMHLLALHQDGS 206
Query: 603 NNPLGL 620
NNP G+
Sbjct: 207 NNPEGI 212
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/92 (35%), Positives = 51/92 (55%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K +PI ++N+ + L+I II+GL L ++YT N +AF
Sbjct: 5 KRNPILVLVNDFVIDSPLPTNLTYFWNFGSLLGVNLVILIISGLTLAMHYTPNTLLAFSS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
V +I R+VN G ++R +HANGASFF F ++Y+
Sbjct: 65 VEHIMRDVNNGWLLRYIHANGASFF-FIWVYL 95
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 RKTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFY 180
RK+HP+ KIIN+ +CL++QIITGLFL ++YTA+ AF
Sbjct: 5 RKSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSAFS 64
Query: 181 RVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYIS 282
+ +ICR+VNYG +IR HANGAS FF+ +I+I+
Sbjct: 65 SIAHICRDVNYGWVIRYTHANGASMFFICLYIHIA 99
Score = 37.5 bits (83), Expect = 0.26
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLK 317
+FFIC+Y+HI RG+YY S+ K
Sbjct: 89 MFFICLYIHIARGLYYGSYLFK 110
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 83.8 bits (198), Expect = 3e-15
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FFICIY HI RG+YY S+ K V L YVLP GQ+SFW ATVITN
Sbjct: 81 LFFICIYTHIARGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITN 140
Query: 432 LLSAIPYLGTILVN*I*GG 488
LL+AIPYLGT + + GG
Sbjct: 141 LLTAIPYLGTTMTXWLWGG 159
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 276
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS F F IY
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLF-FICIY 87
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/86 (47%), Positives = 51/86 (59%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
IFF+C+YLHI R IY+ ++ K YVLP GQ+SFW ATVITN
Sbjct: 96 IFFLCVYLHISRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATVITN 155
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT 509
L SAIPY+G +V I G F++ NAT
Sbjct: 156 LFSAIPYIGNTIVLWIWGSFSISNAT 181
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FFL +++I
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
Query: 280 S 282
S
Sbjct: 106 S 106
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 82.2 bits (194), Expect = 9e-15
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
KTHPI + N+ +CLIIQI+TG+FL ++YT ++++AF
Sbjct: 5 KTHPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFIS 64
Query: 184 VNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
V +I R+VNYG +IR LHAN ASFF F F+Y+
Sbjct: 65 VEHIMRDVNYGWLIRYLHANTASFF-FIFVYL 95
Score = 35.5 bits (78), Expect = 1.0
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESF 308
FFI +YLHIGRG+YY S+
Sbjct: 89 FFIFVYLHIGRGLYYGSY 106
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 81.0 bits (191), Expect = 2e-14
Identities = 45/81 (55%), Positives = 52/81 (64%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF* 557
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNAT F F F + +
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 558 Y*Q*SIYYFYTKQGSNNPLGL 620
F + GSNNP GL
Sbjct: 192 GATVLHLLFLHETGSNNPAGL 212
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 80.6 bits (190), Expect = 3e-14
Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 422
S IFF+ IYLH+ +G+ + SF++ K + YVLP GQ+S WGATV
Sbjct: 82 SIIFFL-IYLHMTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATV 140
Query: 423 ITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIF---YYRSLF*Y*Q*SIYYFYTK 593
ITNLLSAIP +G ++V I GG+ V N T F F F + +F I ++Y
Sbjct: 141 ITNLLSAIPVIGKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYY-- 198
Query: 594 QGSNNPLG 617
GSNNP+G
Sbjct: 199 -GSNNPIG 205
Score = 41.5 bits (93), Expect = 0.016
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +1
Query: 100 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
+L + IQIITGLFLT YY N E F + I YG ++ +H N S +F IY+
Sbjct: 33 SLIMSIQIITGLFLTFYY-ENSENCFDSIYIIHIETFYGVLVHFIHLN-VSSIIFFLIYL 90
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 80.6 bits (190), Expect = 3e-14
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FFI +Y+H+ RG+YY S+ + + YVLP GQ+SFWGATVI
Sbjct: 100 MFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVI 159
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIFYYRSLF*Y*Q*SIYYFYTKQG 599
TNL SAIP +G +V + GGF+VDN T F H++F LF ++ + K+
Sbjct: 160 TNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYLF-PMLLFAVVFLHMWALHVKK- 217
Query: 600 SNNPLGL 620
SNNPLG+
Sbjct: 218 SNNPLGI 224
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS F F +Y+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMF-FIVVYV 107
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 78.6 bits (185), Expect = 1e-13
Identities = 51/126 (40%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FF +Y+HIGRGIYY + V YVLP GQ+S+W + VIT+
Sbjct: 87 MFFFFMYIHIGRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVVITS 146
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIFYYRSLF*Y*Q*SIYY-FYTKQGS 602
LLS IPY+G LV I GGF+V AT F HFI + + I+ + GS
Sbjct: 147 LLSTIPYIGPSLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVV---IIHVGLLHETGS 203
Query: 603 NNPLGL 620
+NPLGL
Sbjct: 204 SNPLGL 209
Score = 62.9 bits (146), Expect = 6e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS F F F+YI
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFF-FMYI 94
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 77.4 bits (182), Expect = 3e-13
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FF +YLHIGRG+Y + L V + YV P GQI GATVIT+L
Sbjct: 95 FFFWVYLHIGRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSL 154
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIF-YYRSLF*Y*Q*SIYYFYTKQGSN 605
LSAIPY+G LV + GGF V T F H++ S+F + Q +++F +K G
Sbjct: 155 LSAIPYMGGFLVKWVWGGFFVKGPTLHRFFSLHYLLPLILSVFVFFQ--VFFFQSKSGV- 211
Query: 606 NPLG 617
NP+G
Sbjct: 212 NPMG 215
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/59 (45%), Positives = 44/59 (74%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFF F ++Y+
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFF-WVYL 101
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/60 (58%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS FF+ F+++
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Score = 41.5 bits (93), Expect = 0.016
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL 314
+FFIC++LH+GRG+YY S+N+
Sbjct: 70 MFFICLFLHVGRGVYYGSYNM 90
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 76.2 bits (179), Expect = 6e-13
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = +3
Query: 213 WLNNSNITC*WSFIFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVL 386
WL + C S +FF +Y+H+ RG+YY S+ + + + YVL
Sbjct: 90 WLLRNMHACGAS-MFFFAVYVHMLRGLYYGSYKEPREVLWILGVIIYLLMMATGFMGYVL 148
Query: 387 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
P GQ+SFWGATVITNL SAIPY G +V + GG++V N T
Sbjct: 149 PWGQMSFWGATVITNLFSAIPYFGESIVTLLWGGYSVGNPT 189
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS F FA +Y+
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFA-VYV 109
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 75.8 bits (178), Expect = 8e-13
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FF+ ++LH+ R +YY S + + + + YVLP GQ+SFWGATVI
Sbjct: 88 LFFVAVFLHLFRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVI 147
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYT--KQG 599
T+L+SA+P +GT LV + GGF+V N T F F F+Y F SI + G
Sbjct: 148 TSLVSAVPIVGTDLVYYLWGGFSVSNPTLNRF--FSFHYLLPFVLAGLSIAHLAALHSYG 205
Query: 600 SNNPLGL 620
S NPL +
Sbjct: 206 STNPLSI 212
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF+ F+++
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 74.1 bits (174), Expect = 2e-12
Identities = 51/129 (39%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FFI +YLHI RG+YY S+ + + YVLP GQ+SFWGATVI
Sbjct: 103 LFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVI 162
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFI--FYYRSLF*Y*Q*SIYYFYTK 593
T L AIP +G + + GG AVDNAT F H++ F +L I+ F++
Sbjct: 163 TGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALV---AIHIWAFHS- 218
Query: 594 QGSNNPLGL 620
G+NNP G+
Sbjct: 219 TGNNNPTGV 227
Score = 69.3 bits (162), Expect = 7e-11
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 100 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIY 276
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FF+ +++
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 277 I 279
I
Sbjct: 112 I 112
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 72.5 bits (170), Expect = 7e-12
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FF +Y H+GRG+YY S+ YVLP GQ+SFWGATVI+N
Sbjct: 92 FFFFMYCHVGRGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNF 151
Query: 435 LSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFY--TKQGSNN 608
L+ IP+ G L+ + GG++V + T F F+ ++ + F +++ ++G++N
Sbjct: 152 LTVIPFFGDTLLKYVLGGYSVCDLTLSRF--FVAHFLAPFLISLMVLFHLIWGHEKGASN 209
Query: 609 PLGL 620
PLG+
Sbjct: 210 PLGV 213
Score = 50.0 bits (114), Expect = 4e-05
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 276
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GAS F F F+Y
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFF-FMY 97
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 72.5 bits (170), Expect = 7e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 258
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVIT 428
FF+ +++H+ +G+YY S+ V L Y GQ+S WGATVIT
Sbjct: 89 FFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVIT 148
Query: 429 NLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTK--QGS 602
NL SAIP++G +V+ + GGF+V N T F F +Y F I + GS
Sbjct: 149 NLFSAIPFVGNDIVSWLWGGFSVSNPTIQRF--FALHYLVPFIIAAMVIMHLMALHIHGS 206
Query: 603 NNPLGL 620
+NPLG+
Sbjct: 207 SNPLGI 212
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 72.5 bits (170), Expect = 7e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 258
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVIT 428
FF+ +++H+ +G+YY S+ V L Y GQ+S WGATVIT
Sbjct: 89 FFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVIT 148
Query: 429 NLLSAIPYLGTILVN*I*GGFAVDN 503
NL SAIP++G +V+ + GGF +++
Sbjct: 149 NLFSAIPFVGNDIVSWLWGGFNMED 173
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 72.5 bits (170), Expect = 7e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 258
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 72.5 bits (170), Expect = 7e-12
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FF+ +Y+HI RG+YY S+ + + YVLP GQ+SFWGATVI
Sbjct: 103 LFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVI 162
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFI--FYYRSLF*Y*Q*SIYYFYTK 593
T L AIP +G + + GG AVDN T F H++ F +L I+ F+T
Sbjct: 163 TGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVV---HIWAFHT- 218
Query: 594 QGSNNPLGL 620
G+NNP G+
Sbjct: 219 TGNNNPTGV 227
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/61 (50%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 100 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIY 276
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FFL +I+
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 277 I 279
I
Sbjct: 112 I 112
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 428
FF +YLHIGRG+YY S+ YVLP GQ+S WGATVIT
Sbjct: 89 FFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVIT 148
Query: 429 NLLSAIPYLGTILVN*I*GGFAVD 500
NL+SAIP++G +V I GG D
Sbjct: 149 NLMSAIPWIGQDIVEFIWGGLYTD 172
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K+HP+ KI+N+ ALCL IQI+TG+ L ++YT ++ AF
Sbjct: 5 KSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNS 64
Query: 184 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
V +I R+VN G ++R LH+N AS FF +++I
Sbjct: 65 VEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 70.5 bits (165), Expect = 3e-11
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +3
Query: 264 CIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSA 443
CIY+HIGRG+YY SF L V YVLP GQ+++W A VI+++++A
Sbjct: 94 CIYVHIGRGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTA 153
Query: 444 IPYLGTILVN*I*GGFAVDNAT*PDF--THFIFYYRSLF*Y*Q*SIYYFYTKQGSNNPLG 617
IP +G + + GG+AV N T HF+ + L + F GS NPLG
Sbjct: 154 IPKVGGEVAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLL--FLHSSGSGNPLG 211
Query: 618 L 620
L
Sbjct: 212 L 212
Score = 55.6 bits (128), Expect = 9e-07
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+F L IY+
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFML-GCIYV 97
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 69.3 bits (162), Expect = 7e-11
Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+F +YLHI RG+ Y SF V YVLP G +S+WG TV+TN
Sbjct: 85 LFMFIMYLHILRGLIYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTN 144
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQ-GSNN 608
+LSAIP +G LV I GG + +T F F Y SLF I+ + GS+N
Sbjct: 145 MLSAIPMVGVYLVETIWGGSSAGVSTLVRFFSF-HYLLSLFIMVFILIHLILLHECGSSN 203
Query: 609 PLGL 620
PLG+
Sbjct: 204 PLGV 207
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K+HP+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNS 64
Query: 184 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ +I R+VN G ++R LH+N AS FF +++I
Sbjct: 65 IEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
Score = 33.9 bits (74), Expect = 3.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESF 308
FF +YLHIGRG+YY S+
Sbjct: 89 FFFLVYLHIGRGMYYGSY 106
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/99 (43%), Positives = 54/99 (54%)
Frame = +3
Query: 213 WLNNSNITC*WSFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 392
WL S + SF+FF+ +++H RGI SF L + YVLP
Sbjct: 70 WLVRSIHSNTASFVFFL-MFMHFFRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPW 128
Query: 393 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
GQ+SFWGATVI NLLS +PY G +LV + GGF V AT
Sbjct: 129 GQMSFWGATVIINLLSILPY-GKMLVVWLWGGFYVSAAT 166
Score = 37.1 bits (82), Expect = 0.34
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLF 264
+ + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F
Sbjct: 33 ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFF 85
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/78 (46%), Positives = 45/78 (57%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 434
FF +YLHIGRG+YY S+ YVLP GQ+S WGATVITNL
Sbjct: 89 FFFLVYLHIGRGLYYASYRAPRT------------LAWVSLYVLPYGQMSLWGATVITNL 136
Query: 435 LSAIPYLGTILVN*I*GG 488
+SAIP++G +V + GG
Sbjct: 137 ISAIPWIGQDIVEFVWGG 154
Score = 66.1 bits (154), Expect = 6e-10
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 4 KTHPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 183
K+HP+ K++N A+CLIIQI+TG+ L ++Y ++ AF
Sbjct: 5 KSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNS 64
Query: 184 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ +I R+VN G +IR LH+N AS FF +++I
Sbjct: 65 IEHIMRDVNNGWLIRYLHSNTASAFFFLVYLHI 97
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/86 (41%), Positives = 47/86 (54%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FFI +YLHI +G+++ S+ LK V + YVL Q+SFW A VIT+
Sbjct: 86 LFFIFLYLHIFKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITS 145
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT 509
LLS IP G +V I GF V AT
Sbjct: 146 LLSVIPIWGPTIVTWIWSGFGVTGAT 171
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FF+F +++I
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
Query: 280 SDEEFTMN 303
F M+
Sbjct: 96 FKGLFFMS 103
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+FF+ IYLHI +G+ S+ L V + YVL GQ+S+W A VIT+
Sbjct: 78 MFFLFIYLHIFKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITS 137
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIF 536
L++++PYLG +V I G F+V T F HFIF
Sbjct: 138 LMTSVPYLGKYMVWWIWGSFSVCENTLKFFYSIHFIF 174
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FFLF +++I
Sbjct: 30 IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 63.7 bits (148), Expect = 3e-09
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
SFIF + +Y H+ +G+ Y SF L L YV+P G +SFW ATVI
Sbjct: 85 SFIF-MTMYAHMFKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVI 143
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYT--KQG 599
T+ +SAIP LG ++ I GG+++ T F F +Y F ++ + +G
Sbjct: 144 TSFMSAIPILGESILYWIWGGYSITGRTLQFF--FTLHYLLPFVISAIAMIHLLLLHSKG 201
Query: 600 SNNPLG 617
S+NPLG
Sbjct: 202 SSNPLG 207
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 276
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGAS F+F +Y
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGAS-FIFMTMY 92
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 63.7 bits (148), Expect = 3e-09
Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 431
+ F+ YLHI RG+ Y L + YVLP GQ+S+WGATVITN
Sbjct: 84 LVFLLTYLHILRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITN 143
Query: 432 LLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIFYYRSLF*Y*Q*SIYYFYTK-QGS 602
LLS+IP + V I GG+ V + T F HFI + L I+ F+ GS
Sbjct: 144 LLSSIP----VAVIWICGGYTVSDPTIKRFFVLHFILPFIGLCIV---FIHIFFLHLHGS 196
Query: 603 NNPLG 617
NPLG
Sbjct: 197 TNPLG 201
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 279
+ IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS FL +++I
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 63.3 bits (147), Expect = 4e-09
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 428
FF+ +YLH+ RG+ Y S+ + V + Y+LP GQ+S+WGA VI
Sbjct: 111 FFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIV 170
Query: 429 NLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHF 530
NL SAIP++G L I G + V +AT F F
Sbjct: 171 NLFSAIPFIGPDLALLIRGDYVVSDATLNRFFSF 204
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS F F +Y+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAF-FVVVYL 117
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 62.9 bits (146), Expect = 6e-09
Identities = 49/126 (38%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 422
SF+F ++LH+GR ++Y S F YVLP GQ+SFWGATV
Sbjct: 95 SFVFLF-LFLHLGRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATV 153
Query: 423 ITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SI-YYFYTK-Q 596
ITNLLS P L+ + GG+ V + T F F+F+Y+ F SI + FY
Sbjct: 154 ITNLLSPFP----SLIEWVSGGYCVHSPTLKRF--FLFHYQLPFLVCGFSILHLFYLHFL 207
Query: 597 GSNNPL 614
SNNPL
Sbjct: 208 SSNNPL 213
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 279
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF FLF F+++
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
Query: 280 SDEEF 294
F
Sbjct: 106 GRAMF 110
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 62.5 bits (145), Expect = 8e-09
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = -1
Query: 260 KKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDPIF 81
KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P F
Sbjct: 3 KKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEPKF 62
Query: 80 HQEEILDGLGKSINELLMI 24
H E+L+G GKS + L I
Sbjct: 63 HHTEMLEGAGKSTSASLSI 81
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/84 (34%), Positives = 50/84 (59%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
S IFF+ +Y+HIGR +YY S+ + V Y+LP Q+S+W ATV+
Sbjct: 77 SIIFFL-VYVHIGRSLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVL 135
Query: 426 TNLLSAIPYLGTILVN*I*GGFAV 497
T+++ ++P +G ++ + + GGF+V
Sbjct: 136 TSIILSVPVVGGLIFSYVVGGFSV 159
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/76 (47%), Positives = 43/76 (56%)
Frame = +3
Query: 393 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*S 572
GQ+ FWGATVITN LS IPY G +VN I GGF+V + T F F F + L
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 573 IYYFYTKQGSNNPLGL 620
F + GS+NPL L
Sbjct: 65 HLVFLHRTGSSNPLKL 80
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +3
Query: 387 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q 566
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +AT F F F + +
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 567 *SIYYFYTKQGSNNPLGL 620
F + GS NP+GL
Sbjct: 62 LIHLVFLHQTGSTNPMGL 79
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 60.5 bits (140), Expect = 3e-08
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 20/79 (25%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAF--------------------YRVNYICRNVNYG*I 222
LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG +
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62
Query: 223 IRTLHANGASFFLFAFIYI 279
+R LHANGASFF F IY+
Sbjct: 63 LRNLHANGASFF-FICIYL 80
Score = 41.1 bits (92), Expect = 0.021
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESF 308
FFICIYLHIGRG+YY SF
Sbjct: 74 FFICIYLHIGRGMYYGSF 91
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+ F C+Y+HIGR ++Y S+ + + L YVLP GQ+S+WGATVI
Sbjct: 101 MLFACLYIHIGRSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVI 160
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDN 503
N + AIP +G L + GG + N
Sbjct: 161 LNAVHAIPLIGQPLSELLLGGDTLGN 186
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
+ I +GLFL I YT +I AF V I R V G IR+LH G + LFA +YI
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVT-MLFACLYI 108
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 59.7 bits (138), Expect = 6e-08
Identities = 24/53 (45%), Positives = 41/53 (77%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 261
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS FL
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFL 82
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+ F+ IY+H+ GIYY S+ + + + Y+LP GQ+S+W A VI
Sbjct: 100 VVFLVIYIHMFTGIYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVI 159
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT 509
TNL IP++G LV I G F V + T
Sbjct: 160 TNLFGGIPFIGDDLVVWIRGNFYVSDPT 187
Score = 41.1 bits (92), Expect = 0.021
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFLFAFIYI 279
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS +F IYI
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAAS-VVFLVIYI 107
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 58.0 bits (134), Expect = 2e-07
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FF +Y+H+ RG+YY S+ + V L Y L GQ+S+W A VI
Sbjct: 104 LFFAALYIHMFRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVI 163
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYT--KQG 599
T L S +P++G + + GGFA + AT F F+ ++ F + + +QG
Sbjct: 164 TGLFSVVPFVGEKIRIWVLGGFAPNAATVNRF--FVLHFTLPFVILAVVGLHVWALHRQG 221
Query: 600 SNNPLGL 620
S NP G+
Sbjct: 222 SGNPTGI 228
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS F FA +YI
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLF-FAALYI 111
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 56.8 bits (131), Expect = 4e-07
Identities = 32/70 (45%), Positives = 38/70 (54%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
S +FF+ YLHI RG+ Y L + YVLP GQ+S+WGATVI
Sbjct: 249 SLVFFLT-YLHILRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVI 307
Query: 426 TNLLSAIPYL 455
TNLLS IP L
Sbjct: 308 TNLLSGIPAL 317
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 279
+ IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F +++I
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHI 259
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 276
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS F FA Y
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLF-FALTY 96
Score = 52.4 bits (120), Expect = 8e-06
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FF Y H+ RG++Y ++ LK +V YVLP G +S+WG TVI
Sbjct: 90 LFFALTYAHVARGVFYGAY-LKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVI 148
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYY--FYTKQG 599
TN+++ +P G ++ GGF + + T F+ ++ F ++ + + G
Sbjct: 149 TNMMTVVPG-GARALDWFQGGFVISSLTLKRV--FVLHFILPFVILGLALVHVLILHQNG 205
Query: 600 SNNPLGL 620
S+NPLGL
Sbjct: 206 SSNPLGL 212
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 56.4 bits (130), Expect = 5e-07
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FFI IYLH+ RG+ S+ + + + Y+LP GQ+S+WGA VI
Sbjct: 97 MFFIVIYLHMFRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVI 156
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIF 536
NL +A+P +G L + G F + +AT F F F
Sbjct: 157 VNLFAAVPVVGEDLSVWVRGDFVISDATLNRFFAFHF 193
Score = 56.0 bits (129), Expect = 7e-07
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 279
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS F F IY+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMF-FIVIYL 104
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 54.4 bits (125), Expect = 2e-06
Identities = 42/125 (33%), Positives = 57/125 (45%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
SF FF +++HI +G++Y S + + YVLP GQ+SFWGATVI
Sbjct: 78 SFYFFF-MFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATVI 136
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQGSN 605
+NLL I GGF V T F F ++ YF ++GS+
Sbjct: 137 SNLLEWFGKAKVITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGSS 192
Query: 606 NPLGL 620
NPL L
Sbjct: 193 NPLTL 197
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 231
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
Score = 34.7 bits (76), Expect = 1.8
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 248 LHFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 382
+H L + T+ T+ LL I L + +W+Y I +S CFHR+C
Sbjct: 56 IHLLPLPVCTHWTKYLLWILPLLRNLKHWHYTTINYHSYCFHRIC 100
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+FFI +YLH+ RG+ Y S + V + YVLP GQ+SFWGA VI
Sbjct: 103 LFFIGVYLHMFRGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVI 162
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT 509
+L AIP +G L I G + + T
Sbjct: 163 ISLFGAIPVIGNGLDEWIMGDYLPSDVT 190
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFLFAFIYI 279
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS F F +Y+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLF-FIGVYL 110
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +3
Query: 420 VITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQG 599
VITNLLSAIPYLG L + GGFAVDNAT F F F + + F + G
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 600 SNNPLGL 620
S NPLG+
Sbjct: 61 SPNPLGI 67
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 413
FFICIYLHIGRG+YY S+ K YVLP GQ+SFWG
Sbjct: 56 FFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFWG 108
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 51.6 bits (118), Expect = 1e-05
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVI 425
+FF YLHI R +YY + Y+ + Y L GQ S+W ATVI
Sbjct: 87 LFFFACYLHIFRAMYYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVI 146
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFI 533
T AIP++G L + + GG+A T F HFI
Sbjct: 147 TGFTRAIPWVGDTLYSFLVGGYAPGTPTLGRFYVLHFI 184
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFA 267
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS F FA
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFA 91
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N S FF+ F++I
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHI 94
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FF+ ++++
Sbjct: 38 MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 195 LPKCKLWLNNSNITC*WSFIFFICIYLHIGRGIYYESFNL 314
LP+ KLWL+ S + + +FF+C+++HIGRG+YY SF L
Sbjct: 6 LPRRKLWLSYSLPSRNGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
+ FI +Y H+ RG+ Y S + V + YVLP G +S+W VI
Sbjct: 93 LIFILLYTHMFRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVI 152
Query: 426 TNLLSAIPYLGTILVN*I*GGFAVDNAT*PDF--THFIFYYRSLF*Y*Q*SIYYFYTKQG 599
T+++ A+P +G L GG + +AT H + ++ + I + + G
Sbjct: 153 TSIMHALPVVGPSLTTLTRGGPGIGSATLQRLLALHVVLFFLIILAAIALHIVALH-RVG 211
Query: 600 SNNPLGL 620
SNNP G+
Sbjct: 212 SNNPDGI 218
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +2
Query: 248 LHFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNY 427
L+ +L T+R+R LL + + + +Y Y ++N FH L +R NI LG N N+
Sbjct: 45 LYALHLPFPTHRSRPLLWLISPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNH 104
Query: 428 KSIICNPLFRN 460
K I NP++RN
Sbjct: 105 KPTISNPVYRN 115
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 48.0 bits (109), Expect = 2e-04
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 246 SFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 425
SF+F I YLHI RG+ Y L + YVLP GQ+SFW TVI
Sbjct: 83 SFVF-ILTYLHILRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVI 141
Query: 426 TNLLSAIPYL-GTILVN*I*GGFAVDNAT*PDFTHFIFY 539
TNLL YL T ++ GG+ V + T F FI++
Sbjct: 142 TNLL----YLFRTCFMD--CGGYLVSDPTLKRFFVFIYF 174
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 279
+ IQI+ G+ L + + A+Y V +I R + G R +HA GASF F+ +++I
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +3
Query: 417 TVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q*SIYYFYTKQ 596
TVITNLLS+IP G ++V I GG++V N T F F F++ L + F
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 597 GSNNPLGL 620
GS NPLGL
Sbjct: 61 GSGNPLGL 68
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 106 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 273
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS + I
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMI 98
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
Y LP QI +W ++T + AIP +G+ LV + G +V +T
Sbjct: 136 YSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQST 179
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 261
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS +
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVI 102
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
L ++Q +TGLFL +YY E AF V I V +G IR+LH A+ L F+++
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV-*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 428
+ FIC+ HIGRG+YY S++ V Y+LP Q+S+W VI+
Sbjct: 101 LVFICLLGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVIS 160
Query: 429 NLLSAIPYLGTILVN*I*GGF 491
+ ++P +G L + + G +
Sbjct: 161 TIFLSLPVIGPHLYSFLLGSY 181
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF+ +++
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 41.9 bits (94), Expect = 0.012
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 115 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 261
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++ +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMV 98
Score = 41.5 bits (93), Expect = 0.016
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
Y+LP Q+SFW TV TN AIP +G LV + GG V T
Sbjct: 140 YLLPWSQLSFWATTVATNSAGAIPVIGGYLVEFLRGGKLVGPPT 183
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.027
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 213
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 40.3 bits (90), Expect = 0.036
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 172 AFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYISDEEFTMN 303
AF V YI VNYG I R H NGAS FF+F +++I F M+
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMS 46
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 39.5 bits (88), Expect = 0.063
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
YVLP +S+WG TV +N+L+ +P +GT L I G +++ T
Sbjct: 104 YVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFT 147
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 39.1 bits (87), Expect = 0.084
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 248 LHFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 409
++ FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 59 INIFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
Y+LP Q+S+W T++TN+L +P +G L + GG V+ T
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNT 88
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNAT 509
Y+LP Q+++W TV TN+ SA+P +G + + GG +D T
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVGAEVRELLLGGRNIDQPT 212
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 273
L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ L +
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVV 98
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 37.9 bits (84), Expect = 0.19
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 105 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFICIYL 275
+ N N +W + + LH ++ N F +LP+CKL L +S TC W I + +YL
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWR-ILLLHLYL 62
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 37.9 bits (84), Expect = 0.19
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +3
Query: 405 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNAT*PDFTHFIFYYRSLF*Y*Q* 569
FWG +VI NLL+ IP++G VN GGF V AT F F F + +
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 570 SIYYFYTKQGSNNPL 614
F + GS+NPL
Sbjct: 62 LHLVFLHEGGSSNPL 76
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 36.7 bits (81), Expect = 0.45
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 255 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 428
F +YLH+ GIYY ++ + V + Y+LP GQ+S+WG V T
Sbjct: 97 FMAIVYLHMFTGIYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIVTT 156
Query: 429 NL 434
+
Sbjct: 157 EI 158
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 36.7 bits (81), Expect = 0.45
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 273
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA F + I
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVI 139
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 36.7 bits (81), Expect = 0.45
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 279
IIQI+TGL L YY AF +I V +G +IR +HA A+ L FI++
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHM 174
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 36.3 bits (80), Expect = 0.59
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 261
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+F +
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLM 106
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 237
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLH 86
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLG 458
Y LP +S+WG TV +N+L+ IP +G
Sbjct: 133 YTLPCTSMSYWGLTVFSNILATIPLIG 159
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 252 IFFICIYLHIGRGIYYESFNLKYV 323
+FFI +YLHI RG+YY S+ ++V
Sbjct: 25 MFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 302
Score = 34.7 bits (76), Expect = 1.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 207 KLWLNNSNITC*WSFIFFICIYLHIG 284
KLW+ S+ITC WS + F IY H G
Sbjct: 259 KLWIRYSSITCTWSNLKFYSIYRHTG 284
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GG 488
Y+LP + ++WG V TN++ +P +G +L + I GG
Sbjct: 146 YLLPWDERAYWGTIVGTNMIGLVPVVGPLLKSAIRGG 182
Score = 33.5 bits (73), Expect = 4.2
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 109 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFL 261
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS +
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMV 104
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 34.3 bits (75), Expect = 2.4
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 429 NLLSAIPYLGTILVN*I*GGFAVDNAT 509
N+LSAIP++G V + GGF+V+NAT
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNAT 54
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -2
Query: 445 IADNRFVITVAPQKDI*PQGKT 380
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 33.5 bits (73), Expect = 4.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 378 YVLP*GQISFWGATVITNLLSAIPYLG 458
Y+LP Q+ FW TV TN+ A P LG
Sbjct: 173 YLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 32.7 bits (71), Expect = 7.3
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 261
++Q++TG+ L + Y + A+ + + +++ G IR LH G++F +
Sbjct: 49 LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMI 98
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 7.3
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -2
Query: 208 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 65
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 112 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 273
I+++ITG + +YYT + + Y+ V YG + +LH+ GA +F +
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLL 141
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 32.3 bits (70), Expect = 9.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 103 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 273
L ++++++TG L Y+ + A+ V+YI V+ G +R LH A + A +
Sbjct: 46 LMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIV 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,592,422
Number of Sequences: 1657284
Number of extensions: 8391739
Number of successful extensions: 15579
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 14909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15504
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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